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  5. Sam_g30402

Sam_g30402


Description : actin filament-bundling factor *(THRUMIN) & original description: none


Gene families : OG0000162 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000162_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g30402

Target Alias Description ECC score Gene Family Method Actions
AT1G64500 No alias Glutaredoxin family protein 0.05 OrthoFinder output from all 47 species
Adi_g020923 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g13283 No alias actin filament-bundling factor *(THRUMIN) & original... 0.03 OrthoFinder output from all 47 species
Als_g10341 No alias actin filament-bundling factor *(THRUMIN) & original... 0.03 OrthoFinder output from all 47 species
Aspi01Gene54978.t1 Aspi01Gene54978 actin filament-bundling factor *(THRUMIN) & original... 0.03 OrthoFinder output from all 47 species
Azfi_s0090.g042605 No alias not classified & original description: CDS=1-1131 0.04 OrthoFinder output from all 47 species
Ceric.03G069000.1 Ceric.03G069000 actin filament-bundling factor *(THRUMIN) & original... 0.06 OrthoFinder output from all 47 species
Dac_g01599 No alias actin filament-bundling factor *(THRUMIN) & original... 0.04 OrthoFinder output from all 47 species
Dac_g39355 No alias actin filament-bundling factor *(THRUMIN) & original... 0.03 OrthoFinder output from all 47 species
Ehy_g16896 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01019562001 No alias No description available 0.04 OrthoFinder output from all 47 species
LOC_Os01g13480.1 LOC_Os01g13480 actin filament-bundling factor (THRUMIN) 0.03 OrthoFinder output from all 47 species
LOC_Os02g51370.1 LOC_Os02g51370 Uncharacterized protein At5g39865 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
LOC_Os08g07450.1 LOC_Os08g07450 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Len_g30170 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g56975 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Mp3g04860.1 No alias actin filament-bundling factor (THRUMIN) 0.02 OrthoFinder output from all 47 species
Msp_g10825 No alias actin filament-bundling factor *(THRUMIN) & original... 0.04 OrthoFinder output from all 47 species
Msp_g17483 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g29256 No alias actin filament-bundling factor *(THRUMIN) & original... 0.02 OrthoFinder output from all 47 species
Nbi_g04826 No alias actin filament-bundling factor *(THRUMIN) & original... 0.03 OrthoFinder output from all 47 species
Nbi_g06898 No alias actin filament-bundling factor *(THRUMIN) & original... 0.04 OrthoFinder output from all 47 species
Pp3c8_13700V3.1 Pp3c8_13700 No annotation 0.01 OrthoFinder output from all 47 species
Smo116000 No alias Cytoskeleton.cp-actin-dependent plastid movement.THRUMIN... 0.05 OrthoFinder output from all 47 species
Solyc08g082590.3.1 Solyc08g082590 actin filament-bundling factor (THRUMIN) 0.03 OrthoFinder output from all 47 species
Tin_g21220 No alias acTin filament-bundling factor *(THRUMIN) & original... 0.02 OrthoFinder output from all 47 species
Zm00001e006789_P001 Zm00001e006789 Uncharacterized protein At5g39865 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Zm00001e016368_P001 Zm00001e016368 actin filament-bundling factor (THRUMIN) 0.05 OrthoFinder output from all 47 species
Zm00001e027223_P001 Zm00001e027223 Uncharacterized protein At5g39865 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
BP GO:0006352 DNA-templated transcription initiation IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
InterPro domains Description Start Stop
IPR002109 Glutaredoxin 330 397
No external refs found!