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  5. Sam_g30445

Sam_g30445


Description : calcium sensor *(CBL) & original description: none


Gene families : OG0000287 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000287_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g30445
Cluster HCCA: Cluster_136

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01035370001 CBL10, SCABP8, ATCBL10 External stimuli response.salinity.SOS (Salt Overly... 0.02 OrthoFinder output from all 47 species
Nbi_g04026 CBL9, ATCBL9 calcium sensor *(CBL) & original description: none 0.02 OrthoFinder output from all 47 species
Smo131200 CBL9, ATCBL9 External stimuli response.salinity.SOS (Salt Overly... 0.02 OrthoFinder output from all 47 species
Spa_g54497 CBL2, ATCBL2 calcium sensor *(CBL) & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e003137_P001 CBL2, ATCBL2,... Calcineurin B-like protein 2 OS=Oryza sativa subsp.... 0.02 OrthoFinder output from all 47 species
Zm00001e024747_P001 CBL4, ATSOS3,... calcium-dependent SOS2 activator SOS3 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002048 EF_hand_dom 107 177
No external refs found!