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  5. Lfl_g28420

Lfl_g28420


Description : not classified & original description: none


Gene families : OG0000106 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000106_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Lfl_g28420

Target Alias Description ECC score Gene Family Method Actions
Adi_g042552 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g107618 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g03456 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g07487 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g08438 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g44515 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g06179 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g08216 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g10429 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g20985 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Ala_g22219 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g31593 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g33207 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ala_g34343 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Als_g21929 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g38295 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g42897 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g43729 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g44160 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g48795 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g48796 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g50257 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g53076 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g54911 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g06958 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene10406.t1 Aspi01Gene10406 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene19705.t1 Aspi01Gene19705 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene19712.t1 Aspi01Gene19712 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene19720.t1 Aspi01Gene19720 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene52694.t1 Aspi01Gene52694 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene65005.t1 Aspi01Gene65005 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0110.g045469 No alias not classified & original description: CDS=1-264 0.02 OrthoFinder output from all 47 species
Cba_g11409 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g27454 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g46435 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.21G060700.1 Ceric.21G060700 not classified & original description: pacid=50604457... 0.02 OrthoFinder output from all 47 species
Dac_g19948 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g44478 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g12006 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g47452 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g06230 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g44529 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Gb_12717 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Gb_20813 No alias no hits & (original description: none) 0.01 OrthoFinder output from all 47 species
LOC_Os01g73250.1 LOC_Os01g73250 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os04g34600.1 LOC_Os04g34600 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Len_g21038 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g21792 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g20821 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g23762 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Lfl_g24553 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Lfl_g25585 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Lfl_g29025 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g06771 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g13104 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g34785 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g36524 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g39930 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g36501 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g08893 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g12596 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g14744 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g38432 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g01442 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g17441 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g29795 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g26868 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g54625 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g61588 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g17372 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g17373 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g21376 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g29846 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Spa_g49460 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g10386 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g21785 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e014777_P001 Zm00001e014777 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0004332 fructose-bisphosphate aldolase activity IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
CC GO:0005840 ribosome IEP HCCA
BP GO:0006090 pyruvate metabolic process IEP HCCA
BP GO:0006091 generation of precursor metabolites and energy IEP HCCA
BP GO:0006096 glycolytic process IEP HCCA
BP GO:0006165 nucleoside diphosphate phosphorylation IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006457 protein folding IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
BP GO:0006757 ATP generation from ADP IEP HCCA
BP GO:0007021 tubulin complex assembly IEP HCCA
BP GO:0007023 post-chaperonin tubulin folding pathway IEP HCCA
BP GO:0009132 nucleoside diphosphate metabolic process IEP HCCA
BP GO:0009135 purine nucleoside diphosphate metabolic process IEP HCCA
BP GO:0009141 nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009144 purine nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009179 purine ribonucleoside diphosphate metabolic process IEP HCCA
BP GO:0009185 ribonucleoside diphosphate metabolic process IEP HCCA
BP GO:0009199 ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009205 purine ribonucleoside triphosphate metabolic process IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
BP GO:0016052 carbohydrate catabolic process IEP HCCA
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP HCCA
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP HCCA
MF GO:0016830 carbon-carbon lyase activity IEP HCCA
MF GO:0016832 aldehyde-lyase activity IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
BP GO:0032787 monocarboxylic acid metabolic process IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
BP GO:0046031 ADP metabolic process IEP HCCA
BP GO:0046034 ATP metabolic process IEP HCCA
BP GO:0046939 nucleotide phosphorylation IEP HCCA
MF GO:0048487 beta-tubulin binding IEP HCCA
MF GO:0051213 dioxygenase activity IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR003496 ABA_WDS 152 222
No external refs found!