Lfl_g28472


Description : histone chaperone *(NASP) & original description: none


Gene families : OG0003988 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003988_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Lfl_g28472

Target Alias Description ECC score Gene Family Method Actions
Aev_g05963 No alias histone chaperone *(NASP) & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.1Z046300.1 Ceric.1Z046300 histone chaperone *(NASP) & original description:... 0.03 OrthoFinder output from all 47 species
Cre06.g280800 No alias Chromatin organisation.histone chaperone... 0.02 OrthoFinder output from all 47 species
Dde_g18750 No alias histone chaperone *(NASP) & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01003774001 No alias Chromatin organisation.histone chaperone... 0.02 OrthoFinder output from all 47 species
LOC_Os07g03070.1 LOC_Os07g03070 histone chaperone (NASP) 0.05 OrthoFinder output from all 47 species
Len_g37814 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g09754 No alias histone chaperone *(NASP) & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g16759 No alias histone chaperone *(NASP) & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g35096 No alias histone chaperone *(NASP) & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g11134 No alias histone chaperone *(NASP) & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e015418_P001 Zm00001e015418 histone chaperone (NASP) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003712 transcription coregulator activity IEP HCCA
MF GO:0004674 protein serine/threonine kinase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006260 DNA replication IEP HCCA
BP GO:0006357 regulation of transcription by RNA polymerase II IEP HCCA
CC GO:0016592 mediator complex IEP HCCA
MF GO:0016835 carbon-oxygen lyase activity IEP HCCA
MF GO:0016836 hydro-lyase activity IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR019544 Tetratricopeptide_SHNi-TPR_dom 230 265
No external refs found!