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  5. Sam_g31576

Sam_g31576


Description : component *(eS30) of small ribosomal-subunit (SSU) proteome & original description: none


Gene families : OG0002477 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002477_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g31576
Cluster HCCA: Cluster_51

Target Alias Description ECC score Gene Family Method Actions
Azfi_s0068.g036442 No alias component *(eS30) of small ribosomal-subunit (SSU)... 0.05 OrthoFinder output from all 47 species
Cba_g65418 No alias component *(eS30) of small ribosomal-subunit (SSU)... 0.04 OrthoFinder output from all 47 species
Cba_g73257 No alias component *(eS30) of small ribosomal-subunit (SSU)... 0.1 OrthoFinder output from all 47 species
Ceric.20G020400.1 Ceric.20G020400 component *(eS30) of small ribosomal-subunit (SSU)... 0.05 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001003.33 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.03 OrthoFinder output from all 47 species
Cre16.g666301 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.05 OrthoFinder output from all 47 species
Dcu_g30830 No alias component *(eS30) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Ehy_g30289 No alias component *(eS30) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Gb_16784 No alias component RPS30 of SSU proteome 0.03 OrthoFinder output from all 47 species
Gb_23464 No alias component RPS30 of SSU proteome 0.03 OrthoFinder output from all 47 species
Nbi_g41508 No alias component *(eS30) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Pp3c2_28870V3.1 Pp3c2_28870 Ribosomal protein S30 family protein 0.01 OrthoFinder output from all 47 species
Ppi_g24413 No alias component *(eS30) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Sam_g35687 No alias component *(eS30) of small ribosomal-subunit (SSU)... 0.07 OrthoFinder output from all 47 species
Sam_g37139 No alias component *(eS30) of small ribosomal-subunit (SSU)... 0.06 OrthoFinder output from all 47 species
Sam_g45897 No alias component *(eS30) of small ribosomal-subunit (SSU)... 0.06 OrthoFinder output from all 47 species
Smo227173 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.03 OrthoFinder output from all 47 species
Solyc08g076340.3.1 Solyc08g076340 component RPS30 of SSU proteome 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0001765 membrane raft assembly IEP HCCA
MF GO:0004129 cytochrome-c oxidase activity IEP HCCA
MF GO:0004857 enzyme inhibitor activity IEP HCCA
MF GO:0004866 endopeptidase inhibitor activity IEP HCCA
MF GO:0004869 cysteine-type endopeptidase inhibitor activity IEP HCCA
MF GO:0005215 transporter activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005507 copper ion binding IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
MF GO:0008199 ferric iron binding IEP HCCA
MF GO:0008324 monoatomic cation transmembrane transporter activity IEP HCCA
MF GO:0009055 electron transfer activity IEP HCCA
BP GO:0009060 aerobic respiration IEP HCCA
MF GO:0015075 monoatomic ion transmembrane transporter activity IEP HCCA
MF GO:0015078 proton transmembrane transporter activity IEP HCCA
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP HCCA
MF GO:0015399 primary active transmembrane transporter activity IEP HCCA
MF GO:0015453 oxidoreduction-driven active transmembrane transporter activity IEP HCCA
BP GO:0015980 energy derivation by oxidation of organic compounds IEP HCCA
MF GO:0016675 oxidoreductase activity, acting on a heme group of donors IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
MF GO:0022804 active transmembrane transporter activity IEP HCCA
MF GO:0022853 active monoatomic ion transmembrane transporter activity IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
MF GO:0022890 inorganic cation transmembrane transporter activity IEP HCCA
MF GO:0030414 peptidase inhibitor activity IEP HCCA
BP GO:0031579 membrane raft organization IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
BP GO:0044854 plasma membrane raft assembly IEP HCCA
BP GO:0044857 plasma membrane raft organization IEP HCCA
BP GO:0045333 cellular respiration IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
BP GO:0061024 membrane organization IEP HCCA
MF GO:0061134 peptidase regulator activity IEP HCCA
MF GO:0061135 endopeptidase regulator activity IEP HCCA
BP GO:0070836 caveola assembly IEP HCCA
BP GO:0071709 membrane assembly IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0140678 molecular function inhibitor activity IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR006846 Ribosomal_S30 78 106
No external refs found!