Sam_g31996


Description : not classified & original description: none


Gene families : OG0001034 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001034_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g31996

Target Alias Description ECC score Gene Family Method Actions
Aob_g16597 ATTOC132, TOC132 component *(Toc90/120/132/159) of outer envelope TOC... 0.03 OrthoFinder output from all 47 species
Cre17.g734300 No alias Translocase of chloroplast 90, chloroplastic... 0.01 OrthoFinder output from all 47 species
LOC_Os03g61890.2 PPI2, ATTOC159,... component Toc90|Toc120|Toc132|Toc159 of outer envelope... 0.05 OrthoFinder output from all 47 species
MA_16870g0010 ATTOC132, TOC132 component Toc90|Toc120|Toc132|Toc159 of outer envelope... 0.02 OrthoFinder output from all 47 species
MA_258608g0010 ATTOC120, TOC120 component Toc90|Toc120|Toc132|Toc159 of outer envelope... 0.03 OrthoFinder output from all 47 species
MA_9202971g0010 ATTOC132, TOC132 Translocase of chloroplast 132, chloroplastic... 0.04 OrthoFinder output from all 47 species
Mp8g08330.1 ATTOC132, TOC132 component Toc90|Toc120|Toc132|Toc159 of outer envelope... 0.02 OrthoFinder output from all 47 species
Sam_g45489 No alias component *(Toc90/120/132/159) of outer envelope TOC... 0.03 OrthoFinder output from all 47 species
Zm00001e027497_P001 PPI2, ATTOC159,... component Toc90|Toc120|Toc132|Toc159 of outer envelope... 0.02 OrthoFinder output from all 47 species
Zm00001e029743_P002 PPI2, ATTOC159,... component Toc90|Toc120|Toc132|Toc159 of outer envelope... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006400 tRNA modification IEP HCCA
BP GO:0008033 tRNA processing IEP HCCA
MF GO:0008168 methyltransferase activity IEP HCCA
MF GO:0008173 RNA methyltransferase activity IEP HCCA
MF GO:0008175 tRNA methyltransferase activity IEP HCCA
MF GO:0008176 tRNA (guanine-N7-)-methyltransferase activity IEP HCCA
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP HCCA
BP GO:0009451 RNA modification IEP HCCA
MF GO:0016423 tRNA (guanine) methyltransferase activity IEP HCCA
MF GO:0016741 transferase activity, transferring one-carbon groups IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA

No InterPro domains available for this sequence

No external refs found!