Description : component *(uL11) of large ribosomal-subunit (LSU) proteome & original description: none
Gene families : OG0001473 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001473_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Sam_g33904 | |
| Cluster | HCCA: Cluster_108 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00105p00048810 | evm_27.TU.AmTr_v1... | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.02 | OrthoFinder output from all 47 species | |
| AT2G37190 | No alias | Ribosomal protein L11 family protein | 0.02 | OrthoFinder output from all 47 species | |
| Azfi_s0279.g062260 | No alias | component *(uL11) of large ribosomal-subunit (LSU)... | 0.02 | OrthoFinder output from all 47 species | |
| Cpa|evm.model.tig00001339.27 | No alias | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.01 | OrthoFinder output from all 47 species | |
| Dac_g01966 | No alias | component *(uL11) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01025189001 | No alias | No description available | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os04g50990.1 | LOC_Os04g50990 | component RPL12 of LSU proteome component | 0.02 | OrthoFinder output from all 47 species | |
| Lfl_g36573 | No alias | component *(uL11) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 47 species | |
| MA_10427147g0010 | No alias | component RPL12 of LSU proteome component | 0.02 | OrthoFinder output from all 47 species | |
| Mp3g02020.1 | No alias | component RPL12 of LSU proteome component | 0.02 | OrthoFinder output from all 47 species | |
| Pp3c15_14410V3.1 | Pp3c15_14410 | Ribosomal protein L11 family protein | 0.01 | OrthoFinder output from all 47 species | |
| Pp3c6_19290V3.1 | Pp3c6_19290 | Ribosomal protein L11 family protein | 0.03 | OrthoFinder output from all 47 species | |
| Smo227409 | No alias | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.02 | OrthoFinder output from all 47 species | |
| Solyc11g065670.1.1 | Solyc11g065670 | component RPL12 of LSU proteome component | 0.03 | OrthoFinder output from all 47 species | |
| Solyc11g069440.1.1 | Solyc11g069440 | component RPL12 of LSU proteome component | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003735 | structural constituent of ribosome | IEA | Interproscan |
| CC | GO:0005840 | ribosome | IEA | Interproscan |
| BP | GO:0006412 | translation | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000413 | protein peptidyl-prolyl isomerization | IEP | HCCA |
| MF | GO:0003755 | peptidyl-prolyl cis-trans isomerase activity | IEP | HCCA |
| MF | GO:0005507 | copper ion binding | IEP | HCCA |
| MF | GO:0016859 | cis-trans isomerase activity | IEP | HCCA |
| BP | GO:0018193 | peptidyl-amino acid modification | IEP | HCCA |
| BP | GO:0018208 | peptidyl-proline modification | IEP | HCCA |
| MF | GO:0044183 | protein folding chaperone | IEP | HCCA |
| MF | GO:0140662 | ATP-dependent protein folding chaperone | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR020783 | Ribosomal_L11_C | 25 | 93 |
| No external refs found! |
