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  5. Lfl_g28830

Lfl_g28830 (GLR3.6, ATGLR3.6)


Aliases : GLR3.6, ATGLR3.6

Description : ligand-gated cation channel *(GLR) & original description: none


Gene families : OG0000075 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000075_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Lfl_g28830
Cluster HCCA: Cluster_17

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00019p00178690 GLR2.7,... Solute transport.channels.GLR ligand-gated cation channel 0.03 OrthoFinder output from all 47 species
AMTR_s00019p00182440 GLR2.8,... Solute transport.channels.GLR ligand-gated cation channel 0.03 OrthoFinder output from all 47 species
AMTR_s00019p00182630 GLR2.7,... Solute transport.channels.GLR ligand-gated cation channel 0.03 OrthoFinder output from all 47 species
AMTR_s00019p00184790 GLR2.7,... Solute transport.channels.GLR ligand-gated cation channel 0.02 OrthoFinder output from all 47 species
AMTR_s00044p00137040 GLR3.3,... Solute transport.channels.GLR ligand-gated cation channel 0.02 OrthoFinder output from all 47 species
AT2G17260 ATGLR3.1, GLR2,... glutamate receptor 2 0.03 OrthoFinder output from all 47 species
AT5G11180 ATGLR2.6, GLR2.6 glutamate receptor 2.6 0.02 OrthoFinder output from all 47 species
AT5G48400 ATGLR1.2, GLR1.2 Glutamate receptor family protein 0.02 OrthoFinder output from all 47 species
Ala_g14918 GLR3.3, ATGLR3.3 ligand-gated cation channel *(GLR) & original description: none 0.04 OrthoFinder output from all 47 species
Als_g28613 GLR3.3, ATGLR3.3 ligand-gated cation channel *(GLR) & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g29969 GLR3.3, ATGLR3.3 ligand-gated cation channel *(GLR) & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g05961 GLR3.3, ATGLR3.3 ligand-gated cation channel *(GLR) & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g10462 GLUR3, GLR3.4, ATGLR3.4 ligand-gated cation channel *(GLR) & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g25107 GLR3.6, ATGLR3.6 ligand-gated cation channel *(GLR) & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene02193.t1 GLR3.3,... ligand-gated cation channel *(GLR) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene30493.t1 ATGLR3.5, GLR6,... ligand-gated cation channel *(GLR) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene41855.t1 GLR3.3,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene41864.t1 ATGLR3.5, GLR6,... ligand-gated cation channel *(GLR) & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene49370.t1 ATGLR3.5, GLR6,... ligand-gated cation channel *(GLR) & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0038.g026117 GLUR3, GLR3.4, ATGLR3.4 ligand-gated cation channel *(GLR) & original... 0.03 OrthoFinder output from all 47 species
Azfi_s0038.g026158 ATGLR3.1, GLR2,... ligand-gated cation channel *(GLR) & original... 0.03 OrthoFinder output from all 47 species
Cba_g32802 GLR3.3, ATGLR3.3 ligand-gated cation channel *(GLR) & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.01G024600.1 GLUR3, GLR3.4,... ligand-gated cation channel *(GLR) & original... 0.04 OrthoFinder output from all 47 species
Ceric.28G068100.1 GLUR3, GLR3.4,... ligand-gated cation channel *(GLR) & original... 0.04 OrthoFinder output from all 47 species
Cpa|evm.model.tig00021569.4 No alias Glutamate receptor 3.1 OS=Oryza sativa subsp. japonica 0.01 OrthoFinder output from all 47 species
GSVIVT01029195001 GLR2.2, ATGLR2.2 Solute transport.channels.GLR ligand-gated cation channel 0.02 OrthoFinder output from all 47 species
GSVIVT01029198001 GLR2.8, ATGLR2.8 Solute transport.channels.GLR ligand-gated cation channel 0.02 OrthoFinder output from all 47 species
GSVIVT01033150001 GLR2.7, ATGLR2.7 Solute transport.channels.GLR ligand-gated cation channel 0.03 OrthoFinder output from all 47 species
Lfl_g02327 GLR3.3, ATGLR3.3 ligand-gated cation channel *(GLR) & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g07325 ATGLR3.5, GLR6, GLR3.5 ligand-gated cation channel *(GLR) & original description: none 0.05 OrthoFinder output from all 47 species
Lfl_g28228 GLR3.3, ATGLR3.3 ligand-gated cation channel *(GLR) & original description: none 0.05 OrthoFinder output from all 47 species
Lfl_g29844 ATGLR3.5, GLR6, GLR3.5 ligand-gated cation channel *(GLR) & original description: none 0.04 OrthoFinder output from all 47 species
MA_10426811g0010 GLUR3, GLR3.4, ATGLR3.4 ligand-gated cation channel (GLR) 0.03 OrthoFinder output from all 47 species
MA_10427025g0010 ATGLR3.5, GLR6, GLR3.5 ligand-gated cation channel (GLR) 0.02 OrthoFinder output from all 47 species
MA_10428521g0010 GLR3.3, ATGLR3.3 ligand-gated cation channel (GLR) 0.02 OrthoFinder output from all 47 species
MA_10434521g0010 GLR2.1, ATGLR2.1 ligand-gated cation channel (GLR) 0.03 OrthoFinder output from all 47 species
MA_212254g0010 GLR3.3, ATGLR3.3 ligand-gated cation channel (GLR) 0.03 OrthoFinder output from all 47 species
Msp_g15242 ATGLR3.5, GLR6, GLR3.5 ligand-gated cation channel *(GLR) & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g16200 GLR3.6, ATGLR3.6 ligand-gated cation channel *(GLR) & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g17636 GLR3.3, ATGLR3.3 ligand-gated cation channel *(GLR) & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g15232 GLR3.3, ATGLR3.3 ligand-gated cation channel *(GLR) & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g26523 GLR3.6, ATGLR3.6 ligand-gated cation channel *(GLR) & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g17572 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g30122 GLUR3, GLR3.4, ATGLR3.4 ligand-gated cation channel *(GLR) & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g62643 GLR3.3, ATGLR3.3 ligand-gated cation channel *(GLR) & original description: none 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0005.g002574 ATGLR3.5, GLR6, GLR3.5 ligand-gated cation channel *(GLR) & original... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0062.g015510 GLUR3, GLR3.4, ATGLR3.4 ligand-gated cation channel *(GLR) & original... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0151.g023436 GLR3.3, ATGLR3.3 ligand-gated cation channel *(GLR) & original... 0.03 OrthoFinder output from all 47 species
Sam_g26653 No alias ligand-gated cation channel *(GLR) & original description: none 0.03 OrthoFinder output from all 47 species
Smo166047 GLR3.3, ATGLR3.3 Solute transport.channels.GLR ligand-gated cation channel 0.02 OrthoFinder output from all 47 species
Spa_g09957 GLUR3, GLR3.4, ATGLR3.4 ligand-gated cation channel *(GLR) & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g22526 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g24701 GLR3.3, ATGLR3.3 ligand-gated cation channel *(GLR) & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g26520 GLR3.3, ATGLR3.3 ligand-gated cation channel *(GLR) & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0006811 monoatomic ion transport IEP HCCA
BP GO:0006820 monoatomic anion transport IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
InterPro domains Description Start Stop
IPR001828 ANF_lig-bd_rcpt 66 426
No external refs found!