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  5. Sam_g35234

Sam_g35234


Description : RING-H2-class ATL-subclass E3 ubiquitin ligase & original description: none


Gene families : OG0000008 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g35234

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00030p00032810 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.04 OrthoFinder output from all 47 species
AT4G09100 No alias RING/U-box superfamily protein 0.02 OrthoFinder output from all 47 species
AT5G57750 No alias RING/U-box superfamily protein 0.03 OrthoFinder output from all 47 species
Aob_g07777 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.04 OrthoFinder output from all 47 species
Aop_g12685 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.06 OrthoFinder output from all 47 species
Aspi01Gene01421.t1 Aspi01Gene01421 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g14726 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.05 OrthoFinder output from all 47 species
Dac_g28799 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.05 OrthoFinder output from all 47 species
Dde_g06659 ATL5 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.04 OrthoFinder output from all 47 species
Dde_g08169 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Gb_04647 ATL2, TL2 RING-H2-class E3 ligase 0.03 OrthoFinder output from all 47 species
Gb_39486 No alias RING-H2 finger protein ATL16 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Mp2g11860.1 No alias RING-H2-class E3 ligase 0.02 OrthoFinder output from all 47 species
Pir_g01265 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.04 OrthoFinder output from all 47 species
Ppi_g12248 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g30331 ATL2, TL2 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.08 OrthoFinder output from all 47 species
Ppi_g42460 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.04 OrthoFinder output from all 47 species
Sam_g01368 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.05 OrthoFinder output from all 47 species
Sam_g28688 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.04 OrthoFinder output from all 47 species
Zm00001e024866_P001 ATL43, Zm00001e024866 RING-H2-class E3 ligase 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001841 Znf_RING 82 125
No external refs found!