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  5. Sam_g35291

Sam_g35291


Description : not classified & original description: none


Gene families : OG0000939 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000939_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g35291
Cluster HCCA: Cluster_166

Target Alias Description ECC score Gene Family Method Actions
Adi_g113322 TTL3, VIT not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g06190 TTL1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g09492 TTL1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g09603 TTL1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g10921 TTL1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene34061.t1 TTL1, Aspi01Gene34061 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.02G088900.1 TTL3, VIT,... not classified & original description: pacid=50584923... 0.02 OrthoFinder output from all 47 species
Dac_g14546 TTL1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g15649 TTL1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g06452 TTL1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g48474 TTL1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g04986 TTL3, VIT not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01005875001 TPR14 TPR repeat-containing thioredoxin TTL1 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
LOC_Os02g51730.1 TPR14, LOC_Os02g51730 Inactive TPR repeat-containing thioredoxin TTL3... 0.02 OrthoFinder output from all 47 species
LOC_Os05g50990.1 TTL4, LOC_Os05g50990 scaffold protein (TTL) of brassinosteroid signalling 0.03 OrthoFinder output from all 47 species
Msp_g35116 TTL1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g07534 TTL1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g09362 TTL1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g29036 TTL1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g07135 TTL1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g01359 TTL1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g06996 TTL1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0063.g015765 TTL1 not classified & original description: CDS=75-2582 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0270.g027013 TTL1 not classified & original description: CDS=784-3654 0.03 OrthoFinder output from all 47 species
Solyc10g007240.3.1 TTL1, Solyc10g007240 scaffold protein (TTL) of brassinosteroid signalling 0.02 OrthoFinder output from all 47 species
Spa_g04571 TTL1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g09257 TTL1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e023863_P001 TPR14, Zm00001e023863 Inactive TPR repeat-containing thioredoxin TTL3... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004764 shikimate 3-dehydrogenase (NADP+) activity IEP HCCA
CC GO:0005739 mitochondrion IEP HCCA
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP HCCA
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP HCCA
InterPro domains Description Start Stop
IPR001440 TPR_1 644 677
IPR013766 Thioredoxin_domain 747 832
No external refs found!