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  5. Sam_g35429

Sam_g35429


Description : not classified & original description: none


Gene families : OG0000038 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g35429
Cluster HCCA: Cluster_155

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00007p00137180 PMR5, TBL44,... Protein PMR5 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AMTR_s00012p00251740 TBL36,... Protein trichome birefringence-like 36 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
AT3G11570 TBL8 TRICHOME BIREFRINGENCE-LIKE 8 0.02 OrthoFinder output from all 47 species
AT3G62390 TBL6 TRICHOME BIREFRINGENCE-LIKE 6 0.02 OrthoFinder output from all 47 species
AT4G11090 TBL23 TRICHOME BIREFRINGENCE-LIKE 23 0.02 OrthoFinder output from all 47 species
AT5G58600 PMR5, TBL44 Plant protein of unknown function (DUF828) 0.02 OrthoFinder output from all 47 species
Aev_g26032 TBL7 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g04841 TBL25 mannan O-acetyltransferase *(MOAT) & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g04395 TBL25 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene03954.t1 TBL11, Aspi01Gene03954 rhamnogalacturonan-I O-acetyltransferase *(TBL) &... 0.03 OrthoFinder output from all 47 species
Aspi01Gene14432.t1 TBL25, Aspi01Gene14432 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene17902.t1 TBL2, Aspi01Gene17902 polysaccharide O-acetyltransferase *(TBR) & original... 0.03 OrthoFinder output from all 47 species
Aspi01Gene64222.t1 TBL14, Aspi01Gene64222 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g31386 TBL5 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.12G092800.1 TBL7, Ceric.12G092800 not classified & original description: pacid=50601292... 0.02 OrthoFinder output from all 47 species
Dcu_g01764 TBL7 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g05620 TBL18 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g52068 TBL11 rhamnogalacturonan-I O-acetyltransferase *(TBL) &... 0.03 OrthoFinder output from all 47 species
LOC_Os06g10560.1 TBR, LOC_Os06g10560 Protein trichome birefringence-like 1 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Lfl_g06257 TBL5 polysaccharide O-acetyltransferase *(TBR) & original... 0.04 OrthoFinder output from all 47 species
Msp_g10102 TBL23 mannan O-acetyltransferase *(MOAT) & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g14491 TBL21 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g36617 TBL2 polysaccharide O-acetyltransferase *(TBR) & original... 0.03 OrthoFinder output from all 47 species
Ppi_g03090 TBL7 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g18523 TBL26 mannan O-acetyltransferase *(MOAT) & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g07293 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc06g050920.4.1 TBL33, Solyc06g050920 xylan O-acetyltransferase (XOAT) 0.02 OrthoFinder output from all 47 species
Solyc06g051350.4.1 ESK1, TBL29,... xylan O-acetyltransferase (XOAT) 0.02 OrthoFinder output from all 47 species
Spa_g51488 TBL21 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e001317_P001 ESK1, TBL29,... xylan O-acetyltransferase (XOAT) 0.02 OrthoFinder output from all 47 species
Zm00001e003120_P001 ESK1, TBL29,... xylan O-acetyltransferase (XOAT) 0.02 OrthoFinder output from all 47 species
Zm00001e006159_P001 TBL33, Zm00001e006159 xylan O-acetyltransferase (XOAT) 0.02 OrthoFinder output from all 47 species
Zm00001e036215_P001 TBR, Zm00001e036215 Protein trichome birefringence OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Zm00001e038331_P001 TBL6, Zm00001e038331 Protein trichome birefringence-like 6 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Zm00001e039173_P001 TBL34, Zm00001e039173 xylan O-acetyltransferase (XOAT) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0016740 transferase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0003777 microtubule motor activity IEP HCCA
MF GO:0004809 tRNA (guanine-N2-)-methyltransferase activity IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006284 base-excision repair IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007018 microtubule-based movement IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
BP GO:0008033 tRNA processing IEP HCCA
MF GO:0008170 N-methyltransferase activity IEP HCCA
MF GO:0008173 RNA methyltransferase activity IEP HCCA
MF GO:0008175 tRNA methyltransferase activity IEP HCCA
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
MF GO:0016423 tRNA (guanine) methyltransferase activity IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR025846 TBL_N 69 122
IPR026057 PC-Esterase 123 409
No external refs found!