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  5. Sam_g36052

Sam_g36052


Description : UBQ ubiquitin-fold protein & original description: none


Gene families : OG0000054 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g36052

Target Alias Description ECC score Gene Family Method Actions
AT4G05320 UBQ10 polyubiquitin 10 0.04 OrthoFinder output from all 47 species
Ala_g27780 UBQ11 UBQ ubiquitin-fold protein & original description: none 0.02 OrthoFinder output from all 47 species
Als_g28951 UBQ11 UBQ ubiquitin-fold protein & original description: none 0.04 OrthoFinder output from all 47 species
Als_g38219 UBQ11 UBQ ubiquitin-fold protein & original description: none 0.03 OrthoFinder output from all 47 species
Als_g58041 UBQ11 UBQ ubiquitin-fold protein & original description: none 0.02 OrthoFinder output from all 47 species
Als_g58519 UBQ11 UBQ ubiquitin-fold protein & original description: none 0.02 OrthoFinder output from all 47 species
Als_g64064 UBQ11 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g17385 UBQ11 UBQ ubiquitin-fold protein & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g71259 UBQ11 UBQ ubiquitin-fold protein & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene23077.t1 UBQ4, Aspi01Gene23077 UBQ ubiquitin-fold protein & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g31376 UBQ14 UBQ ubiquitin-fold protein & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g36803 UBQ11 UBQ ubiquitin-fold protein & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g41473 UBQ14 UBQ ubiquitin-fold protein & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g50341 UBQ14 UBQ ubiquitin-fold protein & original description: none 0.05 OrthoFinder output from all 47 species
Ehy_g29357 UBQ11 not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01023461001 UBQ14 Protein degradation.peptide tagging.Ubiquitin... 0.04 OrthoFinder output from all 47 species
GSVIVT01023471001 UBQ10 Protein degradation.peptide tagging.Ubiquitin... 0.02 OrthoFinder output from all 47 species
LOC_Os10g39590.1 LOC_Os10g39590 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Lfl_g07527 RUB1, ATRUB1, NEDD8 RUB ubiquitin-fold protein & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g17104 UBQ11 UBQ ubiquitin-fold protein & original description: none 0.02 OrthoFinder output from all 47 species
MA_41251g0030 UBQ10 ubiquitin-fold protein (UBQ) 0.03 OrthoFinder output from all 47 species
Mp4g02740.1 UBQ10 ubiquitin-fold protein (UBQ) 0.04 OrthoFinder output from all 47 species
Pnu_g26810 UBQ11 UBQ ubiquitin-fold protein & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g55283 UBQ11 UBQ ubiquitin-fold protein & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g08748 UBQ11 UBQ ubiquitin-fold protein & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g51054 UBQ11 UBQ ubiquitin-fold protein & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g53872 UBQ11 UBQ ubiquitin-fold protein & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g26605 UBQ11 UBQ ubiquiTin-fold protein & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g40776 UBQ14 UBQ ubiquiTin-fold protein & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g46317 UBQ11 UBQ ubiquiTin-fold protein & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005216 monoatomic ion channel activity IEP HCCA
MF GO:0005244 voltage-gated monoatomic ion channel activity IEP HCCA
MF GO:0005247 voltage-gated chloride channel activity IEP HCCA
MF GO:0005253 monoatomic anion channel activity IEP HCCA
MF GO:0005254 chloride channel activity IEP HCCA
MF GO:0005509 calcium ion binding IEP HCCA
BP GO:0006820 monoatomic anion transport IEP HCCA
BP GO:0006821 chloride transport IEP HCCA
MF GO:0008308 voltage-gated monoatomic anion channel activity IEP HCCA
MF GO:0008509 monoatomic anion transmembrane transporter activity IEP HCCA
MF GO:0015103 inorganic anion transmembrane transporter activity IEP HCCA
MF GO:0015108 chloride transmembrane transporter activity IEP HCCA
MF GO:0015267 channel activity IEP HCCA
BP GO:0015698 inorganic anion transport IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
MF GO:0022832 voltage-gated channel activity IEP HCCA
MF GO:0022836 gated channel activity IEP HCCA
MF GO:0022839 monoatomic ion gated channel activity IEP HCCA
InterPro domains Description Start Stop
IPR000626 Ubiquitin-like_dom 231 302
IPR000626 Ubiquitin-like_dom 383 454
IPR000626 Ubiquitin-like_dom 3 74
IPR000626 Ubiquitin-like_dom 155 226
IPR000626 Ubiquitin-like_dom 307 378
IPR000626 Ubiquitin-like_dom 459 530
IPR000626 Ubiquitin-like_dom 79 150
No external refs found!