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  5. Sam_g36642

Sam_g36642


Description : subfamily ABCG transporter & original description: none


Gene families : OG0000139 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000139_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g36642

Target Alias Description ECC score Gene Family Method Actions
Adi_g077367 ATWBC11, ABCG11,... subfamily ABCG transporter & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g085304 ATWBC11, ABCG11,... subfamily ABCG transporter & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g08566 ATWBC11, ABCG11,... subfamily ABCG transporter & original description: none 0.02 OrthoFinder output from all 47 species
Als_g04826 ATWBC11, ABCG11,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g06000 ATWBC11, ABCG11,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g06345 ATWBC11, ABCG11,... subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g08987 ATWBC11, ABCG11,... subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g12494 ATWBC11, ABCG11,... not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g12769 ATWBC11, ABCG11,... subfamily ABCG transporter & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g13814 ATWBC11, ABCG11,... subfamily ABCG transporter & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene24079.t1 ATWBC11, ABCG11,... subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0027.g023711 ATWBC11, ABCG11,... subfamily ABCG transporter & original description: CDS=225-2489 0.05 OrthoFinder output from all 47 species
Azfi_s0112.g045838 ATWBC11, ABCG11,... subfamily ABCG transporter & original description: CDS=706-2901 0.05 OrthoFinder output from all 47 species
Ceric.04G006500.1 ATWBC11, ABCG11,... subfamily ABCG transporter & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.06G041600.1 ATWBC11, ABCG11,... subfamily ABCG transporter & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.39G036200.1 ATWBC11, ABCG11,... subfamily ABCG transporter & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.39G053900.1 ATWBC11, ABCG11,... subfamily ABCG transporter & original description:... 0.03 OrthoFinder output from all 47 species
Dac_g13604 ATWBC11, ABCG11,... subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g22000 ATWBC11, ABCG11,... subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g04054 ATWBC11, ABCG11,... subfamily ABCG transporter & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g14807 ATWBC11, ABCG11,... subfamily ABCG transporter & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g23849 ATWBC11, ABCG11,... subfamily ABCG transporter & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g44861 ATWBC11, ABCG11,... subfamily ABCG transporter & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g16742 ATWBC11, ABCG11,... subfamily ABCG transporter & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g07009 ATWBC11, ABCG11,... subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Gb_18403 ATWBC11, ABCG11,... suberin/cutin lipid exporter (DSO). wax lipid exporter... 0.02 OrthoFinder output from all 47 species
LOC_Os09g03939.1 ATWBC11, ABCG11,... subfamily ABCG transporter 0.02 OrthoFinder output from all 47 species
MA_10436774g0020 ATWBC11, ABCG11,... ABC transporter G family member 11 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
MA_69480g0010 ATWBC11, ABCG11,... suberin/cutin lipid exporter (DSO). wax lipid exporter... 0.02 OrthoFinder output from all 47 species
MA_7934311g0010 ATWBC11, ABCG11,... ABC transporter G family member 11 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Mp2g16700.1 ATWBC11, ABCG11,... suberin/cutin lipid exporter (DSO). subfamily ABCG transporter 0.02 OrthoFinder output from all 47 species
Msp_g14862 ATWBC11, ABCG11,... subfamily ABCG transporter & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g05443 ATWBC11, ABCG11,... subfamily ABCG transporter & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g07758 ATWBC11, ABCG11,... subfamily ABCG transporter & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g10585 ATWBC11, ABCG11,... subfamily ABCG transporter & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g61555 ATWBC11, ABCG11,... subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g03882 ATWBC11, ABCG11,... subfamily ABCG transporter & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g17206 ATWBC11, ABCG11,... not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g31731 ATWBC11, ABCG11,... subfamily ABCG transporter & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g45722 ATWBC11, ABCG11,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo111387 No alias ABC transporter G family member 15 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Smo234186 ATWBC11, ABCG11,... Solute transport.primary active transport.ABC... 0.03 OrthoFinder output from all 47 species
Spa_g08295 ATWBC11, ABCG11,... subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g15429 ATWBC11, ABCG11,... subfamily ABCG transporter & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g16828 ATWBC11, ABCG11,... subfamily ABCG transporter & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g16829 ATWBC11, ABCG11,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g29213 ATWBC11, ABCG11,... subfamily ABCG transporter & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g51135 ATWBC11, ABCG11,... subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g51405 ATWBC11, ABCG11,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g51687 ATWBC11, ABCG11,... subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g02815 ATWBC11, ABCG11,... subfamily ABCG transporter & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e007450_P001 ATWBC11, ABCG11,... subfamily ABCG transporter 0.02 OrthoFinder output from all 47 species
Zm00001e027165_P003 D3, CER5,... wax lipid exporter (CER5). subfamily ABCG transporter 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
MF GO:0140359 ABC-type transporter activity IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000041 transition metal ion transport IEP HCCA
MF GO:0004601 peroxidase activity IEP HCCA
MF GO:0005381 iron ion transmembrane transporter activity IEP HCCA
BP GO:0006826 iron ion transport IEP HCCA
MF GO:0016209 antioxidant activity IEP HCCA
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP HCCA
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP HCCA
MF GO:0019843 rRNA binding IEP HCCA
BP GO:0030001 metal ion transport IEP HCCA
BP GO:0034220 monoatomic ion transmembrane transport IEP HCCA
BP GO:0034755 iron ion transmembrane transport IEP HCCA
MF GO:0046873 metal ion transmembrane transporter activity IEP HCCA
MF GO:0046915 transition metal ion transmembrane transporter activity IEP HCCA
MF GO:0050664 oxidoreductase activity, acting on NAD(P)H, oxygen as acceptor IEP HCCA
BP GO:0098655 monoatomic cation transmembrane transport IEP HCCA
InterPro domains Description Start Stop
IPR043926 ABCG_dom 264 319
IPR003439 ABC_transporter-like_ATP-bd 84 235
IPR013525 ABC_2_trans 397 603
No external refs found!