Sam_g36802

Description : not classified & original description: none

Gene families : OG0000102 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000102_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Sam_g36802

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00025p00245560	ATCHR12,...	Chromatin organisation.chromatin remodeling...	0.03	OrthoFinder output from all 47 species
AT5G19310	No alias	Homeotic gene regulator	0.02	OrthoFinder output from all 47 species
Adi_g011986	CHR5	component *(CHR5) of SAGA transcription co-activator...	0.02	OrthoFinder output from all 47 species
Adi_g104730	PKL, GYM, CHR6,...	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Cba_g33620	CHR5	component *(CHR5) of SAGA transcription co-activator...	0.02	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00000545.10	ATCHR12	Probable ATP-dependent DNA helicase CHR12 OS=Arabidopsis thaliana	0.01	OrthoFinder output from all 47 species
Ore_g23580	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Sacu_v1.1_s0004.g002414	PKR1, CHR4	CHD3-type chromatin remodeling factor *(PKL/PKR) &...	0.03	OrthoFinder output from all 47 species
Sacu_v1.1_s0019.g007981	PKL, GYM, CHR6,...	WRKY-type transcription factor & original description: CDS=1-4410	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	IEA	Interproscan
BP	GO:0006325	chromatin organization	None	Extended
BP	GO:0006338	chromatin remodeling	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016043	cellular component organization	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR015195	SLIDE	121	232

External Links

No external refs found!