Sam_g36950

Description : not classified & original description: none

Gene families : OG0001894 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001894_tree

Sequence : coding (download), protein (download)

Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Sam_g36950

Target	Alias	Description	ECC score	Gene Family Method	Actions
GSVIVT01033246001	No alias	RNA biosynthesis.RNA polymerase II-dependent...	0.02	OrthoFinder output from all 47 species
Sam_g06862	No alias	basal transcription factor *(TFIIb) & original description: none	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	None	Extended
MF	GO:0008134	transcription factor binding	None	Extended
MF	GO:0017025	TBP-class protein binding	IEA	Interproscan
MF	GO:0140296	general transcription initiation factor binding	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
BP	GO:0006835	dicarboxylic acid transport	IEP	HCCA
BP	GO:0015711	organic anion transport	IEP	HCCA
BP	GO:0015740	C4-dicarboxylate transport	IEP	HCCA
BP	GO:0015743	malate transport	IEP	HCCA
BP	GO:0015849	organic acid transport	IEP	HCCA
MF	GO:0019787	ubiquitin-like protein transferase activity	IEP	HCCA
MF	GO:0042626	ATPase-coupled transmembrane transporter activity	IEP	HCCA
MF	GO:0043167	ion binding	IEP	HCCA
MF	GO:0043169	cation binding	IEP	HCCA
MF	GO:0046872	metal ion binding	IEP	HCCA
BP	GO:0046942	carboxylic acid transport	IEP	HCCA
MF	GO:0140359	ABC-type transporter activity	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR013150	TFIIB_cyclin	196	266
IPR013137	Znf_TFIIB	92	134

External Links

No external refs found!