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  5. Sam_g37139

Sam_g37139


Description : component *(eS30) of small ribosomal-subunit (SSU) proteome & original description: none


Gene families : OG0002477 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002477_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g37139
Cluster HCCA: Cluster_67

Target Alias Description ECC score Gene Family Method Actions
Aob_g38889 No alias component *(eS30) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Cre16.g666301 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.05 OrthoFinder output from all 47 species
Dcu_g18710 No alias component *(eS30) of small ribosomal-subunit (SSU)... 0.08 OrthoFinder output from all 47 species
Ehy_g30289 No alias component *(eS30) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Gb_23464 No alias component RPS30 of SSU proteome 0.04 OrthoFinder output from all 47 species
Mp2g24290.1 No alias component RPS30 of SSU proteome 0.03 OrthoFinder output from all 47 species
Mp8g09080.1 No alias component RPS30 of SSU proteome 0.05 OrthoFinder output from all 47 species
Nbi_g43255 No alias component *(eS30) of small ribosomal-subunit (SSU)... 0.05 OrthoFinder output from all 47 species
Pp3c1_420V3.1 Pp3c1_420 Ribosomal protein S30 family protein 0.03 OrthoFinder output from all 47 species
Pp3c2_29010V3.1 Pp3c2_29010 Ribosomal protein S30 family protein 0.01 OrthoFinder output from all 47 species
Sacu_v1.1_s0024.g008991 No alias component *(eS30) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Sam_g05835 No alias component *(eS30) of small ribosomal-subunit (SSU)... 0.04 OrthoFinder output from all 47 species
Sam_g31576 No alias component *(eS30) of small ribosomal-subunit (SSU)... 0.06 OrthoFinder output from all 47 species
Sam_g35687 No alias component *(eS30) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Sam_g45897 No alias component *(eS30) of small ribosomal-subunit (SSU)... 0.05 OrthoFinder output from all 47 species
Sam_g52915 No alias component *(eS30) of small ribosomal-subunit (SSU)... 0.04 OrthoFinder output from all 47 species
Solyc08g076340.3.1 Solyc08g076340 component RPS30 of SSU proteome 0.04 OrthoFinder output from all 47 species
Spa_g45532 No alias component *(eS30) of small ribosomal-subunit (SSU)... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
InterPro domains Description Start Stop
IPR006846 Ribosomal_S30 76 122
IPR000626 Ubiquitin-like_dom 9 68
No external refs found!