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  5. Sam_g37259

Sam_g37259


Description : not classified & original description: none


Gene families : OG0000540 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000540_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g37259

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00030p00143350 MKS1,... No description available 0.02 OrthoFinder output from all 47 species
AMTR_s00183p00034990 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
AT1G21326 No alias VQ motif-containing protein 0.02 OrthoFinder output from all 47 species
Adi_g081271 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g05089 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g09743 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g23289 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g20976 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene09531.t1 MKS1, Aspi01Gene09531 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g00588 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ehy_g27081 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g28557 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Gb_08522 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os08g01260.1 MKS1, LOC_Os08g01260 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Len_g25842 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_370498g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Pir_g61464 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g16814 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g24422 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0008.g004079 No alias not classified & original description: CDS=1-978 0.03 OrthoFinder output from all 47 species
Solyc11g005720.1.1 MKS1, Solyc11g005720 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Spa_g16218 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e037399_P001 MKS1, Zm00001e037399 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
CC GO:0005739 mitochondrion IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
MF GO:0015299 obsolete solute:proton antiporter activity IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
BP GO:0032780 negative regulation of ATP-dependent activity IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
MF GO:0042030 ATPase inhibitor activity IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0043462 regulation of ATP-dependent activity IEP HCCA
BP GO:0044092 negative regulation of molecular function IEP HCCA
BP GO:0065009 regulation of molecular function IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
MF GO:0140678 molecular function inhibitor activity IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
InterPro domains Description Start Stop
IPR008889 VQ 125 151
No external refs found!