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  5. Sam_g37444

Sam_g37444


Description : not classified & original description: none


Gene families : OG0000563 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000563_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g37444
Cluster HCCA: Cluster_172

Target Alias Description ECC score Gene Family Method Actions
Adi_g007707 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g076637 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g092655 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g10707 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g04993 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g34174 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene45536.t1 Aspi01Gene45536 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.23G036900.1 Ceric.23G036900 not classified & original description: pacid=50610458... 0.02 OrthoFinder output from all 47 species
Cre07.g352650 No alias No description available 0.02 OrthoFinder output from all 47 species
Dac_g02177 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g09258 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g01493 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g07551 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g03990 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g12794 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Nbi_g18686 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g16710 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g05596 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo413714 No alias No description available 0.01 OrthoFinder output from all 47 species
Tin_g27795 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP HCCA
MF GO:0000774 adenyl-nucleotide exchange factor activity IEP HCCA
BP GO:0001522 pseudouridine synthesis IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP HCCA
CC GO:0005839 proteasome core complex IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0006364 rRNA processing IEP HCCA
BP GO:0006457 protein folding IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
MF GO:0008168 methyltransferase activity IEP HCCA
BP GO:0009451 RNA modification IEP HCCA
MF GO:0009982 pseudouridine synthase activity IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0016072 rRNA metabolic process IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016741 transferase activity, transferring one-carbon groups IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0016866 intramolecular transferase activity IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018208 peptidyl-proline modification IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
MF GO:0042802 identical protein binding IEP HCCA
MF GO:0042803 protein homodimerization activity IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
MF GO:0046983 protein dimerization activity IEP HCCA
MF GO:0051087 chaperone binding IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
MF GO:0060590 ATPase regulator activity IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140299 small molecule sensor activity IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
MF GO:0140612 DNA damage sensor activity IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
MF GO:0140664 ATP-dependent DNA damage sensor activity IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR000504 RRM_dom 261 328
IPR000504 RRM_dom 141 205
No external refs found!