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  5. Sam_g37510

Sam_g37510


Description : subunit zeta *(CCT6) of CCT chaperonin folding complex & original description: none


Gene families : OG0003995 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003995_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g37510

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00010p00016450 evm_27.TU.AmTr_v1... Cytoskeleton.actin and tubulin folding.CCT chaperonin... 0.03 OrthoFinder output from all 47 species
AT3G02530 No alias TCP-1/cpn60 chaperonin family protein 0.02 OrthoFinder output from all 47 species
AT5G16070 No alias TCP-1/cpn60 chaperonin family protein 0.04 OrthoFinder output from all 47 species
Azfi_s0038.g026142 No alias subunit zeta *(CCT6) of CCT chaperonin folding complex &... 0.03 OrthoFinder output from all 47 species
Ceric.16G067100.1 Ceric.16G067100 subunit zeta *(CCT6) of CCT chaperonin folding complex &... 0.05 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000789.37 No alias Cytoskeleton.actin and tubulin folding.CCT chaperonin... 0.03 OrthoFinder output from all 47 species
Cre09.g397200 No alias Cytoskeleton.actin and tubulin folding.CCT chaperonin... 0.03 OrthoFinder output from all 47 species
Gb_18443 No alias CCT6 subunit zeta of CCT chaperonin folding complex 0.02 OrthoFinder output from all 47 species
LOC_Os05g05470.1 LOC_Os05g05470 CCT6 subunit zeta of CCT chaperonin folding complex 0.02 OrthoFinder output from all 47 species
MA_8438g0020 No alias CCT6 subunit zeta of CCT chaperonin folding complex 0.02 OrthoFinder output from all 47 species
Mp8g07530.1 No alias CCT6 subunit zeta of CCT chaperonin folding complex 0.03 OrthoFinder output from all 47 species
Ore_g33910 No alias subunit zeta *(CCT6) of CCT chaperonin folding complex &... 0.02 OrthoFinder output from all 47 species
Pp3c11_26000V3.1 Pp3c11_26000 TCP-1/cpn60 chaperonin family protein 0.02 OrthoFinder output from all 47 species
Solyc02g085790.3.1 Solyc02g085790 CCT6 subunit zeta of CCT chaperonin folding complex 0.04 OrthoFinder output from all 47 species
Spa_g18568 No alias subunit zeta *(CCT6) of CCT chaperonin folding complex &... 0.04 OrthoFinder output from all 47 species
Zm00001e010996_P001 Zm00001e010996 CCT6 subunit zeta of CCT chaperonin folding complex 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0004190 aspartic-type endopeptidase activity IEP HCCA
CC GO:0005839 proteasome core complex IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
MF GO:0070001 aspartic-type peptidase activity IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
InterPro domains Description Start Stop
IPR002423 Cpn60/GroEL/TCP-1 29 528
No external refs found!