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  5. Sam_g37554

Sam_g37554


Description : not classified & original description: none


Gene families : OG0000120 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000120_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g37554
Cluster HCCA: Cluster_121

Target Alias Description ECC score Gene Family Method Actions
AT1G58470 RBP1, ATRBP1 RNA-binding protein 1 0.02 OrthoFinder output from all 47 species
AT3G13224 No alias RNA-binding (RRM/RBD/RNP motifs) family protein 0.02 OrthoFinder output from all 47 species
AT4G14300 No alias RNA-binding (RRM/RBD/RNP motifs) family protein 0.02 OrthoFinder output from all 47 species
Adi_g059746 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g116756 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g08530 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0033.g025010 No alias not classified & original description: CDS=262-1737 0.02 OrthoFinder output from all 47 species
Ceric.12G066500.1 Ceric.12G066500 not classified & original description: pacid=50602160... 0.03 OrthoFinder output from all 47 species
Dac_g15186 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g04078 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g02394 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g07522 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g02719 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g07737 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g07969 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g02189 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g02211 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc04g014820.4.1 Solyc04g014820 Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Spa_g26586 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g04592 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEP HCCA
CC GO:0008250 oligosaccharyltransferase complex IEP HCCA
CC GO:0140534 endoplasmic reticulum protein-containing complex IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
CC GO:1990234 transferase complex IEP HCCA
InterPro domains Description Start Stop
IPR000504 RRM_dom 91 156
IPR000504 RRM_dom 191 249
No external refs found!