Sam_g37665

Description : alpha-Tubulin component *(TUA) of alpha-beta-Tubulin heterodimer & original description: none

Gene families : OG0000233 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000233_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Sam_g37665

Target	Alias	Description	ECC score	Gene Family Method
AT5G19770	TUA3	tubulin alpha-3	0.03	OrthoFinder output from all 47 species
Adi_g088318	TOR2, TUA4	alpha-Tubulin component *(TUA) of alpha-beta-Tubulin...	0.03	OrthoFinder output from all 47 species
Als_g07261	TOR2, TUA4	alpha-Tubulin component *(TUA) of alpha-beta-Tubulin...	0.04	OrthoFinder output from all 47 species
Als_g47452	TUA6	alpha-Tubulin component *(TUA) of alpha-beta-Tubulin...	0.02	OrthoFinder output from all 47 species
Aop_g62975	TUA3	alpha-Tubulin component *(TUA) of alpha-beta-Tubulin...	0.02	OrthoFinder output from all 47 species
Dac_g14622	TOR2, TUA4	alpha-Tubulin component *(TUA) of alpha-beta-Tubulin...	0.02	OrthoFinder output from all 47 species
Dcu_g08731	TOR2, TUA4	alpha-Tubulin component *(TUA) of alpha-beta-Tubulin...	0.02	OrthoFinder output from all 47 species
Dcu_g13468	TUA3	alpha-Tubulin component *(TUA) of alpha-beta-Tubulin...	0.03	OrthoFinder output from all 47 species
Gb_00907	TOR2, TUA4	component alpha-Tubulin of alpha-beta-Tubulin heterodimer	0.05	OrthoFinder output from all 47 species
Gb_02715	TOR2, TUA4	component alpha-Tubulin of alpha-beta-Tubulin heterodimer	0.03	OrthoFinder output from all 47 species
Lfl_g06964	TOR2, TUA4	alpha-Tubulin component *(TUA) of alpha-beta-Tubulin...	0.03	OrthoFinder output from all 47 species
Lfl_g22862	TOR2, TUA4	alpha-Tubulin component *(TUA) of alpha-beta-Tubulin...	0.03	OrthoFinder output from all 47 species
Lfl_g23977	TOR2, TUA4	alpha-Tubulin component *(TUA) of alpha-beta-Tubulin...	0.02	OrthoFinder output from all 47 species
MA_184192g0010	TOR2, TUA4	component alpha-Tubulin of alpha-beta-Tubulin heterodimer	0.02	OrthoFinder output from all 47 species
MA_5963g0010	TUA3	Tubulin alpha-2 chain OS=Eleusine indica...	0.02	OrthoFinder output from all 47 species
Mp4g00550.1	TUA3	component alpha-Tubulin of alpha-beta-Tubulin heterodimer	0.04	OrthoFinder output from all 47 species
Mp8g12620.1	TUA6	component alpha-Tubulin of alpha-beta-Tubulin heterodimer	0.02	OrthoFinder output from all 47 species
Msp_g07903	TOR2, TUA4	alpha-Tubulin component *(TUA) of alpha-beta-Tubulin...	0.03	OrthoFinder output from all 47 species
Nbi_g10101	TUA3	alpha-Tubulin component *(TUA) of alpha-beta-Tubulin...	0.03	OrthoFinder output from all 47 species
Nbi_g13353	TUA6	alpha-Tubulin component *(TUA) of alpha-beta-Tubulin...	0.03	OrthoFinder output from all 47 species
Ore_g28972	TUA3	alpha-Tubulin component *(TUA) of alpha-beta-Tubulin...	0.02	OrthoFinder output from all 47 species
Pp3c16_6220V3.1	TUA3, Pp3c16_6220	tubulin alpha-3	0.01	OrthoFinder output from all 47 species
Pp3c25_1010V3.1	TUA3, Pp3c25_1010	tubulin alpha-5	0.02	OrthoFinder output from all 47 species
Pp3c4_1960V3.1	TOR2, TUA4, Pp3c4_1960	tubulin alpha-2 chain	0.01	OrthoFinder output from all 47 species
Ppi_g35812	TUA6	alpha-Tubulin component *(TUA) of alpha-beta-Tubulin...	0.03	OrthoFinder output from all 47 species
Solyc08g006890.3.1	TUA6, Solyc08g006890	component alpha-Tubulin of alpha-beta-Tubulin heterodimer	0.02	OrthoFinder output from all 47 species
Spa_g05098	TOR2, TUA4	alpha-Tubulin component *(TUA) of alpha-beta-Tubulin...	0.02	OrthoFinder output from all 47 species
Spa_g10039	TUA6	alpha-Tubulin component *(TUA) of alpha-beta-Tubulin...	0.02	OrthoFinder output from all 47 species
Spa_g57342	TUA6	alpha-Tubulin component *(TUA) of alpha-beta-Tubulin...	0.04	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005525	GTP binding	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0019001	guanyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032561	guanyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003847	1-alkyl-2-acetylglycerophosphocholine esterase activity	IEP	HCCA
BP	GO:0016042	lipid catabolic process	IEP	HCCA
MF	GO:0052689	carboxylic ester hydrolase activity	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR018316	Tubulin/FtsZ_2-layer-sand-dom	263	392
IPR003008	Tubulin_FtsZ_GTPase	3	213

External Links

No external refs found!

Sam_g37665

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation