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  5. Sam_g37791

Sam_g37791


Description : component *(eS27) of small ribosomal-subunit (SSU) proteome & original description: none


Gene families : OG0001813 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001813_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g37791

Target Alias Description ECC score Gene Family Method Actions
AT2G45710 No alias Zinc-binding ribosomal protein family protein 0.02 OrthoFinder output from all 47 species
AT3G61110 ARS27A, RS27A ribosomal protein S27 0.03 OrthoFinder output from all 47 species
AT3G61111 No alias Zinc-binding ribosomal protein family protein 0.03 OrthoFinder output from all 47 species
AT5G47930 No alias Zinc-binding ribosomal protein family protein 0.03 OrthoFinder output from all 47 species
Aspi01Gene01804.t1 ARS27A, RS27A,... component *(eS27) of small ribosomal-subunit (SSU)... 0.02 OrthoFinder output from all 47 species
Aspi01Gene36661.t1 ARS27A, RS27A,... component *(eS27) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Aspi01Gene55503.t1 ARS27A, RS27A,... component *(eS27) of small ribosomal-subunit (SSU)... 0.02 OrthoFinder output from all 47 species
Azfi_s0004.g008655 ARS27A, RS27A component *(eS27) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Azfi_s0182.g056413 ARS27A, RS27A component *(eS27) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Cba_g12664 ARS27A, RS27A component *(eS27) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Cba_g35394 No alias component *(eS27) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Cre12.g529400 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.02 OrthoFinder output from all 47 species
Dac_g17983 ARS27A, RS27A component *(eS27) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Dcu_g35625 ARS27A, RS27A component *(eS27) of small ribosomal-subunit (SSU)... 0.02 OrthoFinder output from all 47 species
Dcu_g35656 ARS27A, RS27A component *(eS27) of small ribosomal-subunit (SSU)... 0.04 OrthoFinder output from all 47 species
Dde_g00057 ARS27A, RS27A component *(eS27) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
MA_54625g0010 ARS27A, RS27A component RPS27 of SSU proteome 0.05 OrthoFinder output from all 47 species
Mp5g09510.1 No alias component RPS27 of SSU proteome 0.02 OrthoFinder output from all 47 species
Pp3c1_15840V3.1 Pp3c1_15840 ribosomal protein S27 0.04 OrthoFinder output from all 47 species
Pp3c22_18310V3.1 ARS27A, RS27A,... ribosomal protein S27 0.03 OrthoFinder output from all 47 species
Pp3c2_20540V3.1 ARS27A, RS27A,... ribosomal protein S27 0.04 OrthoFinder output from all 47 species
Spa_g16488 ARS27A, RS27A component *(eS27) of small ribosomal-subunit (SSU)... 0.04 OrthoFinder output from all 47 species
Spa_g53353 ARS27A, RS27A component *(eS27) of small ribosomal-subunit (SSU)... 0.04 OrthoFinder output from all 47 species
Spa_g55045 ARS27A, RS27A component *(eS27) of small ribosomal-subunit (SSU)... 0.05 OrthoFinder output from all 47 species
Spa_g57360 ARS27A, RS27A component *(eS27) of small ribosomal-subunit (SSU)... 0.02 OrthoFinder output from all 47 species
Tin_g24199 ARS27A, RS27A component *(eS27) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Zm00001e024704_P001 ARS27A, RS27A,... component RPS27 of SSU proteome 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
MF GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0019843 rRNA binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0044183 protein folding chaperone IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140662 ATP-dependent protein folding chaperone IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR000592 Ribosomal_S27 82 135
No external refs found!