Sam_g37800

Description : methylation reader Alfin of PRC1 complex & original description: none

Gene families : OG0000258 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000258_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Sam_g37800

Target	Alias	Description	ECC score	Gene Family Method
Adi_g019488	AL2	methylation reader Alfin of PRC1 complex & original...	0.03	OrthoFinder output from all 47 species
Adi_g021591	AL1	methylation reader Alfin of PRC1 complex & original...	0.02	OrthoFinder output from all 47 species
Als_g06205	AL2	methylation reader Alfin of PRC1 complex & original...	0.02	OrthoFinder output from all 47 species
Aop_g04965	AL2	methylation reader Alfin of PRC1 complex & original...	0.03	OrthoFinder output from all 47 species
Aspi01Gene09474.t1	AL1, Aspi01Gene09474	methylation reader Alfin of PRC1 complex & original...	0.03	OrthoFinder output from all 47 species
Aspi01Gene55219.t1	AL2, Aspi01Gene55219	methylation reader Alfin of PRC1 complex & original...	0.03	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00021357.26	No alias	No description available	0.02	OrthoFinder output from all 47 species
Cre10.g441050	AL1	RNA biosynthesis.transcriptional activation.Alfin-like...	0.01	OrthoFinder output from all 47 species
Dde_g00476	AL2	methylation reader Alfin of PRC1 complex & original...	0.03	OrthoFinder output from all 47 species
Ehy_g08950	AL5	methylation reader Alfin of PRC1 complex & original...	0.02	OrthoFinder output from all 47 species
LOC_Os01g66420.1	AL5, LOC_Os01g66420	Alfin-like transcription factor	0.02	OrthoFinder output from all 47 species
Lfl_g38122	AL4	methylation reader Alfin of PRC1 complex & original...	0.03	OrthoFinder output from all 47 species
Zm00001e035527_P001	AL5, Zm00001e035527	Alfin-like transcription factor	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	None	Extended
BP	GO:0006355	regulation of DNA-templated transcription	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
MF	GO:0042393	histone binding	IEA	Interproscan
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003676	nucleic acid binding	IEP	HCCA
MF	GO:0004637	phosphoribosylamine-glycine ligase activity	IEP	HCCA
BP	GO:0006144	purine nucleobase metabolic process	IEP	HCCA
BP	GO:0009112	nucleobase metabolic process	IEP	HCCA
BP	GO:0009113	purine nucleobase biosynthetic process	IEP	HCCA
MF	GO:0016874	ligase activity	IEP	HCCA
MF	GO:0016879	ligase activity, forming carbon-nitrogen bonds	IEP	HCCA
BP	GO:0046112	nucleobase biosynthetic process	IEP	HCCA
BP	GO:0055086	nucleobase-containing small molecule metabolic process	IEP	HCCA
BP	GO:0072521	purine-containing compound metabolic process	IEP	HCCA
BP	GO:0072522	purine-containing compound biosynthetic process	IEP	HCCA
MF	GO:0097159	organic cyclic compound binding	IEP	HCCA
MF	GO:1901363	heterocyclic compound binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR019787	Znf_PHD-finger	280	328
IPR021998	Alfin_N	107	232

External Links

No external refs found!

Sam_g37800

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation