Description : not classified & original description: none
Gene families : OG0000092 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000092_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Sam_g38004 | |
| Cluster | HCCA: Cluster_118 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Aop_g07604 | ATPUB17, PUB17 | E3 ubiquitin ligase & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aspi01Gene36187.t1 | ATPUB17, PUB17,... | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Azfi_s0060.g034769 | PUB13, ATPUB13 | E3 ubiquitin ligase & original description: CDS=1-2214 | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.13G074400.1 | ATPUB17, PUB17,... | E3 ubiquitin ligase & original description:... | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01006481001 | PUB8, B80 | U-box domain-containing protein 8 OS=Arabidopsis thaliana | 0.04 | OrthoFinder output from all 47 species | |
| GSVIVT01030205001 | No alias | U-box domain-containing protein 16 OS=Arabidopsis thaliana | 0.03 | OrthoFinder output from all 47 species | |
| Gb_10627 | PUB8, B80 | U-box domain-containing protein 13 OS=Arabidopsis... | 0.02 | OrthoFinder output from all 47 species | |
| Gb_10871 | ATPUB17, PUB17 | E3 ubiquitin ligase (PUB) | 0.03 | OrthoFinder output from all 47 species | |
| Gb_20805 | ATPUB17, PUB17 | E3 ubiquitin ligase (PUB) | 0.05 | OrthoFinder output from all 47 species | |
| LOC_Os02g49950.1 | LOC_Os02g49950 | E3 ubiquitin ligase (PUB) | 0.04 | OrthoFinder output from all 47 species | |
| MA_69133g0010 | PUB14, ATPUB14 | E3 ubiquitin ligase (PUB) | 0.02 | OrthoFinder output from all 47 species | |
| Nbi_g07136 | PUB13, ATPUB13 | E3 ubiquitin ligase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g06266 | PUB14, ATPUB14 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Sam_g28822 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e036734_P001 | PUB14, ATPUB14,... | E3 ubiquitin ligase (PUB) | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0005515 | protein binding | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0016043 | cellular component organization | IEP | HCCA |
| MF | GO:0016788 | hydrolase activity, acting on ester bonds | IEP | HCCA |
| MF | GO:0030599 | pectinesterase activity | IEP | HCCA |
| BP | GO:0042545 | cell wall modification | IEP | HCCA |
| BP | GO:0045229 | external encapsulating structure organization | IEP | HCCA |
| MF | GO:0052689 | carboxylic ester hydrolase activity | IEP | HCCA |
| BP | GO:0071554 | cell wall organization or biogenesis | IEP | HCCA |
| BP | GO:0071555 | cell wall organization | IEP | HCCA |
| BP | GO:0071840 | cellular component organization or biogenesis | IEP | HCCA |
| No external refs found! |
