Sam_g38005


Description : EC_2.1 transferase transferring one-carbon group & original description: none


Gene families : OG0005139 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005139_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g38005

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00010p00267610 evm_27.TU.AmTr_v1... Photosynthesis.calvin cycle.ribulose-1,5-bisphosphat... 0.03 OrthoFinder output from all 47 species
Ceric.11G013100.1 Ceric.11G013100 EC_2.1 transferase transferring one-carbon group &... 0.02 OrthoFinder output from all 47 species
GSVIVT01003217001 No alias Photosynthesis.calvin cycle.ribulose-1,5-bisphosphat... 0.03 OrthoFinder output from all 47 species
Gb_38065 No alias lysine N-methyltransferase involved in RuBisCo regulation 0.02 OrthoFinder output from all 47 species
Solyc05g013160.4.1 Solyc05g013160 lysine N-methyltransferase involved in RuBisCo regulation 0.02 OrthoFinder output from all 47 species
Zm00001e034101_P002 Zm00001e034101 lysine N-methyltransferase involved in RuBisCo regulation 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
Type GO Term Name Evidence Source
BP GO:0006091 generation of precursor metabolites and energy IEP HCCA
BP GO:0009767 photosynthetic electron transport chain IEP HCCA
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP HCCA
MF GO:0016655 oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0016866 intramolecular transferase activity IEP HCCA
MF GO:0016868 intramolecular transferase activity, phosphotransferases IEP HCCA
BP GO:0022900 electron transport chain IEP HCCA
InterPro domains Description Start Stop
IPR015353 Rubisco_LSMT_subst-bd 317 442
IPR001214 SET_dom 72 281
No external refs found!