Sam_g38009


Description : manganese cation transporter *(Mn-CDF) & original description: none


Gene families : OG0000679 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000679_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g38009

Target Alias Description ECC score Gene Family Method Actions
Aspi01Gene54995.t2 Aspi01Gene54995 manganese cation transporter *(Mn-CDF) & original... 0.02 OrthoFinder output from all 47 species
MA_96461g0010 ATMTP11, MTP11 manganese cation transporter (Mn-CDF) 0.02 OrthoFinder output from all 47 species
Nbi_g10501 ATMTP11, MTP11 manganese cation transporter *(Mn-CDF) & original... 0.03 OrthoFinder output from all 47 species
Pnu_g15698 ATMTP11, MTP11 manganese cation transporter *(Mn-CDF) & original... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0081.g018041 No alias manganese cation transporter *(Mn-CDF) & original... 0.04 OrthoFinder output from all 47 species
Solyc12g017340.1.1 Solyc12g017340 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Solyc12g017350.2.1 Solyc12g017350 manganese cation transporter (Mn-CDF) 0.02 OrthoFinder output from all 47 species
Solyc12g100300.2.1 Solyc12g100300 manganese cation transporter (Mn-CDF) 0.02 OrthoFinder output from all 47 species
Zm00001e017026_P001 Zm00001e017026 manganese cation transporter (Mn-CDF) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0006812 monoatomic cation transport IEA Interproscan
MF GO:0008324 monoatomic cation transmembrane transporter activity IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0008081 phosphoric diester hydrolase activity IEP HCCA
MF GO:0008374 O-acyltransferase activity IEP HCCA
BP GO:0009719 response to endogenous stimulus IEP HCCA
BP GO:0009725 response to hormone IEP HCCA
BP GO:0009733 response to auxin IEP HCCA
BP GO:0010033 response to organic substance IEP HCCA
MF GO:0015267 channel activity IEP HCCA
MF GO:0015399 primary active transmembrane transporter activity IEP HCCA
MF GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
BP GO:0042221 response to chemical IEP HCCA
MF GO:0042578 phosphoric ester hydrolase activity IEP HCCA
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP HCCA
MF GO:0140359 ABC-type transporter activity IEP HCCA
InterPro domains Description Start Stop
IPR002524 Cation_efflux 121 311
IPR027470 Cation_efflux_CTD 318 392
No external refs found!