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  5. Sam_g38062

Sam_g38062


Description : EC_5.2 cis-trans-isomerase & original description: none


Gene families : OG0000219 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000219_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g38062
Cluster HCCA: Cluster_145

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00009p00179330 ROC2,... Protein modification.protein folding and quality... 0.1 OrthoFinder output from all 47 species
AMTR_s00041p00200040 ROC3,... Protein modification.protein folding and quality... 0.02 OrthoFinder output from all 47 species
AT3G56070 ROC2 rotamase cyclophilin 2 0.1 OrthoFinder output from all 47 species
AT4G34960 No alias Cyclophilin-like peptidyl-prolyl cis-trans isomerase... 0.02 OrthoFinder output from all 47 species
Adi_g016344 No alias EC_5.2 cis-trans-isomerase & original description: none 0.05 OrthoFinder output from all 47 species
Adi_g017075 No alias EC_5.2 cis-trans-isomerase & original description: none 0.01 OrthoFinder output from all 47 species
Adi_g089449 No alias EC_5.2 cis-trans-isomerase & original description: none 0.02 OrthoFinder output from all 47 species
Als_g05955 ROC1 EC_5.2 cis-trans-isomerase & original description: none 0.03 OrthoFinder output from all 47 species
Als_g12365 No alias EC_5.2 cis-trans-isomerase & original description: none 0.03 OrthoFinder output from all 47 species
Als_g13368 No alias EC_5.2 cis-trans-isomerase & original description: none 0.01 OrthoFinder output from all 47 species
Als_g62881 ATCYP20-2, CYP20-2 EC_5.2 cis-trans-isomerase & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g06151 ROC7 EC_5.2 cis-trans-isomerase & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0176.g056010 ATCYP20-2, CYP20-2 EC_5.2 cis-trans-isomerase & original description: CDS=207-734 0.15 OrthoFinder output from all 47 species
Cba_g12199 ROC5, ATCYP1 EC_5.2 cis-trans-isomerase & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g53361 No alias EC_5.2 cis-trans-isomerase & original description: none 0.01 OrthoFinder output from all 47 species
Cba_g71186 CYP5, ATCYP5, CYP19-4 EC_5.2 cis-trans-isomerase & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.10G059600.1 ROC7, Ceric.10G059600 EC_5.2 cis-trans-isomerase & original description:... 0.03 OrthoFinder output from all 47 species
Cre01.g002300 No alias Protein modification.protein folding and quality... 0.02 OrthoFinder output from all 47 species
Cre12.g495951 ATCYP20-2, CYP20-2 Protein modification.protein folding and quality... 0.01 OrthoFinder output from all 47 species
Dde_g11262 No alias EC_5.2 cis-trans-isomerase & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g20933 No alias EC_5.2 cis-trans-isomerase & original description: none 0.03 OrthoFinder output from all 47 species
Gb_38344 No alias protein folding catalyst 0.07 OrthoFinder output from all 47 species
LOC_Os09g39780.2 ROC2, LOC_Os09g39780 protein folding catalyst 0.06 OrthoFinder output from all 47 species
Len_g11459 ATCYP20-2, CYP20-2 EC_5.2 cis-trans-isomerase & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g25791 ROC3 EC_5.2 cis-trans-isomerase & original description: none 0.02 OrthoFinder output from all 47 species
MA_69667g0010 ROC3 protein folding catalyst 0.02 OrthoFinder output from all 47 species
Mp1g21570.1 CYP5, ATCYP5, CYP19-4 protein folding catalyst 0.02 OrthoFinder output from all 47 species
Mp2g15770.1 No alias protein folding catalyst 0.03 OrthoFinder output from all 47 species
Nbi_g03408 ATCYP20-2, CYP20-2 EC_5.2 cis-trans-isomerase & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g55179 ROC7 EC_5.2 cis-trans-isomerase & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g05661 No alias EC_5.2 cis-trans-isomerase & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g12856 ATCYP20-2, CYP20-2 EC_5.2 cis-trans-isomerase & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0069.g016514 No alias EC_5.2 cis-trans-isomerase & original description: CDS=1-489 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0071.g016829 ATCYP20-2, CYP20-2 EC_5.2 cis-trans-isomerase & original description: CDS=122-877 0.02 OrthoFinder output from all 47 species
Smo111263 ROC7 Protein modification.protein folding and quality... 0.05 OrthoFinder output from all 47 species
Smo74823 No alias Protein modification.protein folding and quality... 0.02 OrthoFinder output from all 47 species
Solyc10g054910.1.1 ROC3, Solyc10g054910 protein folding catalyst 0.02 OrthoFinder output from all 47 species
Solyc11g006070.3.1 Solyc11g006070 protein folding catalyst 0.08 OrthoFinder output from all 47 species
Zm00001e032890_P001 ROC2, Zm00001e032890 protein folding catalyst 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEA Interproscan
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005741 mitochondrial outer membrane IEP HCCA
CC GO:0005840 ribosome IEP HCCA
BP GO:0006066 alcohol metabolic process IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
MF GO:0008097 5S rRNA binding IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0016311 dephosphorylation IEP HCCA
BP GO:0019751 polyol metabolic process IEP HCCA
MF GO:0019843 rRNA binding IEP HCCA
CC GO:0019867 outer membrane IEP HCCA
CC GO:0031966 mitochondrial membrane IEP HCCA
CC GO:0031968 organelle outer membrane IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
BP GO:0043647 inositol phosphate metabolic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
BP GO:0044282 small molecule catabolic process IEP HCCA
BP GO:0046164 alcohol catabolic process IEP HCCA
BP GO:0046174 polyol catabolic process IEP HCCA
BP GO:0046434 organophosphate catabolic process IEP HCCA
BP GO:0046838 phosphorylated carbohydrate dephosphorylation IEP HCCA
BP GO:0046855 inositol phosphate dephosphorylation IEP HCCA
BP GO:0071545 inositol phosphate catabolic process IEP HCCA
CC GO:0098588 bounding membrane of organelle IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
BP GO:1901615 organic hydroxy compound metabolic process IEP HCCA
BP GO:1901616 organic hydroxy compound catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR002130 Cyclophilin-type_PPIase_dom 99 253
No external refs found!