Lfl_g29191 (JAZ4, TIFY6A)


Aliases : JAZ4, TIFY6A

Description : TIFY-type transcription factor & original description: none


Gene families : OG0000154 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000154_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Lfl_g29191

Target Alias Description ECC score Gene Family Method Actions
AT1G74950 TIFY10B, JAZ2 TIFY domain/Divergent CCT motif family protein 0.03 OrthoFinder output from all 47 species
AT3G17860 JAI3, JAZ3, TIFY6B jasmonate-zim-domain protein 3 0.05 OrthoFinder output from all 47 species
Adi_g015978 JAZ12, TIFY3B TIFY-type transcription factor & original description: none 0.06 OrthoFinder output from all 47 species
Adi_g052507 JAI3, JAZ3, TIFY6B TIFY-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g17914 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g18483 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g18484 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g18969 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g23977 JAI3, JAZ3, TIFY6B not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aev_g42158 JAI3, JAZ3, TIFY6B TIFY-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g46406 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g10282 JAZ12, TIFY3B TIFY-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Als_g49957 JAI3, JAZ3, TIFY6B TIFY-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.01G114200.1 JAI3, JAZ3,... TIFY-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Dcu_g20319 JAI3, JAZ3, TIFY6B not classified & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01016721001 TIFY10A, JAZ1 RNA biosynthesis.transcriptional activation.TIFY... 0.03 OrthoFinder output from all 47 species
LOC_Os03g08320.1 TIFY10B, JAZ2,... transcription factor (TIFY) 0.03 OrthoFinder output from all 47 species
LOC_Os03g08330.1 TIFY10A, JAZ1,... transcription factor (TIFY) 0.04 OrthoFinder output from all 47 species
LOC_Os09g26780.1 TIFY10A, JAZ1,... transcription factor (TIFY) 0.03 OrthoFinder output from all 47 species
LOC_Os10g25290.1 TIFY10B, JAZ2,... transcription factor (TIFY) 0.04 OrthoFinder output from all 47 species
MA_10229741g0010 TIFY10A, JAZ1 transcription factor (TIFY) 0.05 OrthoFinder output from all 47 species
MA_10434826g0030 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_14247g0030 JAZ12, TIFY3B transcription factor (TIFY) 0.04 OrthoFinder output from all 47 species
MA_8355655g0010 JAZ12, TIFY3B transcription factor (TIFY) 0.03 OrthoFinder output from all 47 species
MA_8757791g0010 TIFY10A, JAZ1 transcription factor (TIFY) 0.04 OrthoFinder output from all 47 species
MA_88009g0010 No alias transcription factor (TIFY) 0.03 OrthoFinder output from all 47 species
Solyc03g122190.3.1 TIFY10B, JAZ2,... transcription factor (TIFY) 0.04 OrthoFinder output from all 47 species
Spa_g18435 JAI3, JAZ3, TIFY6B not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g24981 JAI3, JAZ3, TIFY6B TIFY-type transcription factor & original description: none 0.07 OrthoFinder output from all 47 species
Tin_g19939 JAZ12, TIFY3B TIFY-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e000589_P001 TIFY10A, JAZ1,... transcription factor (TIFY) 0.04 OrthoFinder output from all 47 species
Zm00001e000590_P001 TIFY10A, JAZ1,... transcription factor (TIFY) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0003916 DNA topoisomerase activity IEP HCCA
MF GO:0003917 DNA topoisomerase type I (single strand cut, ATP-independent) activity IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006265 DNA topological change IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006952 defense response IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
BP GO:0071103 DNA conformation change IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR018467 CCT_CS 293 317
IPR010399 Tify_dom 158 187
No external refs found!