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  5. Sam_g38451

Sam_g38451


Description : EC_5.1 racemase or epimerase & original description: none


Gene families : OG0000465 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000465_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g38451
Cluster HCCA: Cluster_107

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00024p00132940 UGE5,... Carbohydrate metabolism.nucleotide sugar... 0.02 OrthoFinder output from all 47 species
AT1G12780 ATUGE1, UGE1 UDP-D-glucose/UDP-D-galactose 4-epimerase 1 0.04 OrthoFinder output from all 47 species
Adi_g025471 UGE5 EC_5.1 racemase or epimerase & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g01852 UGE2, ATUGE2 EC_5.1 racemase or epimerase & original description: none 0.02 OrthoFinder output from all 47 species
Als_g37527 UGE5 EC_5.1 racemase or epimerase & original description: none 0.01 OrthoFinder output from all 47 species
Aob_g06642 MUR4, UXE1, HSR8 EC_5.1 racemase or epimerase & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.07G016400.1 UGE2, ATUGE2,... EC_5.1 racemase or epimerase & original description:... 0.03 OrthoFinder output from all 47 species
Ehy_g08341 No alias EC_5.1 racemase or epimerase & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os05g51670.1 UGE2, ATUGE2,... UDP-D-glucose 4-epimerase 0.02 OrthoFinder output from all 47 species
LOC_Os07g04690.1 MUR4, UXE1,... UDP-D-xylose 4-epimerase 0.04 OrthoFinder output from all 47 species
Lfl_g04833 UGE5 EC_5.1 racemase or epimerase & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g02051 UGE5 EC_5.1 racemase or epimerase & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g03384 UGE2, ATUGE2 EC_5.1 racemase or epimerase & original description: none 0.02 OrthoFinder output from all 47 species
Pp3c5_25130V3.1 REB1, UGE4,... NAD(P)-binding Rossmann-fold superfamily protein 0.01 OrthoFinder output from all 47 species
Sacu_v1.1_s0002.g001039 UGE5 EC_5.1 racemase or epimerase & original description: CDS=1-1365 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0867.g027810 UGE2, ATUGE2 not classified & original description: CDS=124-1029 0.02 OrthoFinder output from all 47 species
Smo438368 UGE5 Carbohydrate metabolism.nucleotide sugar... 0.03 OrthoFinder output from all 47 species
Solyc08g080570.4.1 ATUGE1, UGE1,... UDP-D-glucose 4-epimerase 0.03 OrthoFinder output from all 47 species
Zm00001e001385_P002 MUR4, UXE1,... UDP-D-xylose 4-epimerase 0.02 OrthoFinder output from all 47 species
Zm00001e001664_P001 UGE2, ATUGE2,... UDP-D-glucose 4-epimerase 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0004379 glycylpeptide N-tetradecanoyltransferase activity IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
MF GO:0016410 N-acyltransferase activity IEP HCCA
MF GO:0019107 myristoyltransferase activity IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR016040 NAD(P)-bd_dom 8 215
No external refs found!