Lfl_g29225


Description : regulatory protein *(SHOU4) involved in cellulose synthase trafficking & original description: none


Gene families : OG0000929 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000929_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Lfl_g29225

Target Alias Description ECC score Gene Family Method Actions
Adi_g014699 No alias regulatory protein *(SHOU4) involved in cellulose... 0.06 OrthoFinder output from all 47 species
Adi_g014773 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g074099 No alias regulatory protein *(SHOU4) involved in cellulose... 0.05 OrthoFinder output from all 47 species
Aev_g11688 No alias regulatory protein *(SHOU4) involved in cellulose... 0.05 OrthoFinder output from all 47 species
Aev_g18177 No alias regulatory protein *(SHOU4) involved in cellulose... 0.05 OrthoFinder output from all 47 species
Ala_g08556 No alias regulatory protein *(SHOU4) involved in cellulose... 0.05 OrthoFinder output from all 47 species
Ala_g14842 No alias regulatory protein *(SHOU4) involved in cellulose... 0.03 OrthoFinder output from all 47 species
Als_g01771 No alias regulatory protein *(SHOU4) involved in cellulose... 0.05 OrthoFinder output from all 47 species
Als_g15204 No alias regulatory protein *(SHOU4) involved in cellulose... 0.05 OrthoFinder output from all 47 species
Als_g49969 No alias regulatory protein *(SHOU4) involved in cellulose... 0.03 OrthoFinder output from all 47 species
Aob_g01916 No alias regulatory protein *(SHOU4) involved in cellulose... 0.02 OrthoFinder output from all 47 species
Aob_g11781 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g02864 No alias regulatory protein *(SHOU4) involved in cellulose... 0.06 OrthoFinder output from all 47 species
Aop_g14554 No alias regulatory protein *(SHOU4) involved in cellulose... 0.04 OrthoFinder output from all 47 species
Cba_g34999 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.12G073600.1 Ceric.12G073600 regulatory protein *(SHOU4) involved in cellulose... 0.03 OrthoFinder output from all 47 species
Dac_g03755 No alias regulatory protein *(SHOU4) involved in cellulose... 0.03 OrthoFinder output from all 47 species
Dac_g08975 No alias regulatory protein *(SHOU4) involved in cellulose... 0.03 OrthoFinder output from all 47 species
Dac_g11604 No alias regulatory protein *(SHOU4) involved in cellulose... 0.04 OrthoFinder output from all 47 species
Dcu_g14768 No alias regulatory protein *(SHOU4) involved in cellulose... 0.04 OrthoFinder output from all 47 species
Dde_g02263 No alias regulatory protein *(SHOU4) involved in cellulose... 0.03 OrthoFinder output from all 47 species
Ehy_g05868 No alias regulatory protein *(SHOU4) involved in cellulose... 0.05 OrthoFinder output from all 47 species
GSVIVT01029320001 No alias Uncharacterized membrane protein At1g16860... 0.02 OrthoFinder output from all 47 species
Gb_02329 No alias SHOU4-type cellulose synthase CSC-interactive protein 0.02 OrthoFinder output from all 47 species
Gb_33458 No alias SHOU4-type cellulose synthase CSC-interactive protein 0.03 OrthoFinder output from all 47 species
LOC_Os04g51710.1 LOC_Os04g51710 SHOU4-type cellulose synthase CSC-interactive protein 0.04 OrthoFinder output from all 47 species
LOC_Os08g13350.1 LOC_Os08g13350 SHOU4-type cellulose synthase CSC-interactive protein 0.05 OrthoFinder output from all 47 species
MA_3898g0010 No alias Uncharacterized membrane protein At1g16860... 0.03 OrthoFinder output from all 47 species
MA_9168g0010 No alias SHOU4-type cellulose synthase CSC-interactive protein 0.06 OrthoFinder output from all 47 species
Msp_g11445 No alias regulatory protein *(SHOU4) involved in cellulose... 0.03 OrthoFinder output from all 47 species
Msp_g13201 No alias regulatory protein *(SHOU4) involved in cellulose... 0.03 OrthoFinder output from all 47 species
Nbi_g05342 No alias regulatory protein *(SHOU4) involved in cellulose... 0.03 OrthoFinder output from all 47 species
Nbi_g10144 No alias regulatory protein *(SHOU4) involved in cellulose... 0.05 OrthoFinder output from all 47 species
Nbi_g25398 No alias regulatory protein *(SHOU4) involved in cellulose... 0.03 OrthoFinder output from all 47 species
Pir_g45908 No alias regulatory protein *(SHOU4) involved in cellulose... 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0001.g000434 No alias regulatory protein *(SHOU4) involved in cellulose... 0.03 OrthoFinder output from all 47 species
Sam_g16842 No alias regulatory protein *(SHOU4) involved in cellulose... 0.03 OrthoFinder output from all 47 species
Smo170682 No alias Uncharacterized membrane protein At1g16860... 0.07 OrthoFinder output from all 47 species
Smo438884 No alias Uncharacterized membrane protein At1g16860... 0.02 OrthoFinder output from all 47 species
Solyc04g014680.4.1 Solyc04g014680 Uncharacterized membrane protein At1g16860... 0.04 OrthoFinder output from all 47 species
Solyc12g017450.2.1 Solyc12g017450 SHOU4-type cellulose synthase CSC-interactive protein 0.05 OrthoFinder output from all 47 species
Spa_g16427 No alias regulatory protein *(SHOU4) involved in cellulose... 0.05 OrthoFinder output from all 47 species
Tin_g10031 No alias regulatory protein *(SHOU4) involved in cellulose... 0.03 OrthoFinder output from all 47 species
Tin_g25164 No alias regulatory protein *(SHOU4) involved in cellulose... 0.04 OrthoFinder output from all 47 species
Zm00001e007013_P001 Zm00001e007013 SHOU4-type cellulose synthase CSC-interactive protein 0.02 OrthoFinder output from all 47 species
Zm00001e022289_P002 Zm00001e022289 SHOU4-type cellulose synthase CSC-interactive protein 0.05 OrthoFinder output from all 47 species
Zm00001e040067_P002 Zm00001e040067 SHOU4-type cellulose synthase CSC-interactive protein 0.05 OrthoFinder output from all 47 species
Zm00001e041596_P001 Zm00001e041596 SHOU4-type cellulose synthase CSC-interactive protein 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
BP GO:0000096 sulfur amino acid metabolic process IEP HCCA
MF GO:0003779 actin binding IEP HCCA
MF GO:0004489 methylenetetrahydrofolate reductase (NAD(P)H) activity IEP HCCA
MF GO:0005085 guanyl-nucleotide exchange factor activity IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0006555 methionine metabolic process IEP HCCA
BP GO:0006790 sulfur compound metabolic process IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0007010 cytoskeleton organization IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
BP GO:0009066 aspartate family amino acid metabolic process IEP HCCA
MF GO:0016645 oxidoreductase activity, acting on the CH-NH group of donors IEP HCCA
MF GO:0016646 oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0030234 enzyme regulator activity IEP HCCA
MF GO:0030695 GTPase regulator activity IEP HCCA
MF GO:0033925 mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase activity IEP HCCA
MF GO:0051287 NAD binding IEP HCCA
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP HCCA
MF GO:0098772 molecular function regulator activity IEP HCCA
MF GO:0140677 molecular function activator activity IEP HCCA
MF GO:0140678 molecular function inhibitor activity IEP HCCA
BP GO:1901605 alpha-amino acid metabolic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!