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  5. Sam_g38723

Sam_g38723


Description : Qc-type SYP5-group component of SNARE membrane fusion complex & original description: none


Gene families : OG0001545 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001545_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g38723

Target Alias Description ECC score Gene Family Method Actions
Aev_g18125 ATSYP52, SYP52 Qc-type SYP5-group component of SNARE membrane fusion... 0.03 OrthoFinder output from all 47 species
Aspi01Gene15433.t1 ATSYP52, SYP52,... Qc-type SYP5-group component of SNARE membrane fusion... 0.03 OrthoFinder output from all 47 species
Lfl_g41096 ATSYP52, SYP52 Qc-type SYP5-group component of SNARE membrane fusion... 0.03 OrthoFinder output from all 47 species
Mp3g14430.1 ATSYP52, SYP52 SYP5 group Qc-type SNARE protein 0.03 OrthoFinder output from all 47 species
Nbi_g04027 ATSYP52, SYP52 Qc-type SYP5-group component of SNARE membrane fusion... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0009605 response to external stimulus IEP HCCA
BP GO:0009606 tropism IEP HCCA
BP GO:0010274 hydrotropism IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
MF GO:0046983 protein dimerization activity IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
MF GO:0070569 uridylyltransferase activity IEP HCCA

No InterPro domains available for this sequence

No external refs found!