Sam_g38753

Description : anion channel / anion:proton antiporter *(CLC) & original description: none

Gene families : OG0002475 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002475_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Sam_g38753

Target	Alias	Description	ECC score	Gene Family Method
AT4G35440	CLC-E, ATCLC-E, CLCE	chloride channel E	0.03	OrthoFinder output from all 47 species
Azfi_s0094.g043398	CLC-E, ATCLC-E, CLCE	anion channel / anion:proton antiporter *(CLC) &...	0.04	OrthoFinder output from all 47 species
GSVIVT01014852001	ATCLC-F, CLCF, CLC-F	Solute transport.carrier-mediated transport.CLC anion...	0.02	OrthoFinder output from all 47 species
Len_g10338	CLC-E, ATCLC-E, CLCE	anion channel / anion:proton antiporter *(CLC) &...	0.03	OrthoFinder output from all 47 species
Solyc01g112310.4.1	CLC-E, ATCLC-E,...	anion channel / anion:proton antiporter (CLC)	0.01	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005215	transporter activity	None	Extended
MF	GO:0005216	monoatomic ion channel activity	None	Extended
MF	GO:0005244	voltage-gated monoatomic ion channel activity	None	Extended
MF	GO:0005247	voltage-gated chloride channel activity	IEA	Interproscan
MF	GO:0005253	monoatomic anion channel activity	None	Extended
MF	GO:0005254	chloride channel activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006810	transport	None	Extended
BP	GO:0006811	monoatomic ion transport	None	Extended
BP	GO:0006820	monoatomic anion transport	None	Extended
BP	GO:0006821	chloride transport	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
MF	GO:0008308	voltage-gated monoatomic anion channel activity	None	Extended
MF	GO:0008509	monoatomic anion transmembrane transporter activity	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0015075	monoatomic ion transmembrane transporter activity	None	Extended
MF	GO:0015103	inorganic anion transmembrane transporter activity	None	Extended
MF	GO:0015108	chloride transmembrane transporter activity	None	Extended
MF	GO:0015267	channel activity	None	Extended
MF	GO:0015318	inorganic molecular entity transmembrane transporter activity	None	Extended
BP	GO:0015698	inorganic anion transport	None	Extended
CC	GO:0016020	membrane	IEA	Interproscan
MF	GO:0022803	passive transmembrane transporter activity	None	Extended
MF	GO:0022832	voltage-gated channel activity	None	Extended
MF	GO:0022836	gated channel activity	None	Extended
MF	GO:0022839	monoatomic ion gated channel activity	None	Extended
MF	GO:0022857	transmembrane transporter activity	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0055085	transmembrane transport	IEA	Interproscan
CC	GO:0110165	cellular anatomical entity	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004518	nuclease activity	IEP	HCCA
BP	GO:0006720	isoprenoid metabolic process	IEP	HCCA
MF	GO:0008170	N-methyltransferase activity	IEP	HCCA
MF	GO:0008276	protein methyltransferase activity	IEP	HCCA
BP	GO:0008299	isoprenoid biosynthetic process	IEP	HCCA
BP	GO:0008610	lipid biosynthetic process	IEP	HCCA
MF	GO:0008757	S-adenosylmethionine-dependent methyltransferase activity	IEP	HCCA
MF	GO:0016278	lysine N-methyltransferase activity	IEP	HCCA
MF	GO:0016279	protein-lysine N-methyltransferase activity	IEP	HCCA
MF	GO:0018024	histone lysine N-methyltransferase activity	IEP	HCCA
MF	GO:0042054	histone methyltransferase activity	IEP	HCCA
BP	GO:0044255	cellular lipid metabolic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001807	Cl-channel_volt-gated	7	173
IPR000644	CBS_dom	327	373
IPR000644	CBS_dom	242	292

External Links

No external refs found!

Sam_g38753

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation