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  5. Sam_g38823

Sam_g38823


Description : component *(COI) of jasmonic acid receptor complex & original description: none


Gene families : OG0000211 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000211_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g38823

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00029p00217840 COI1,... Phytohormones.jasmonic acid.perception and signal... 0.04 OrthoFinder output from all 47 species
Adi_g001615 COI1 component *(COI) of jasmonic acid receptor complex &... 0.02 OrthoFinder output from all 47 species
Adi_g107960 TIR1 substrate adaptor of SCF E3 ubiquitin ligase *(TIR1/AFB)... 0.02 OrthoFinder output from all 47 species
Aob_g03539 COI1 component *(COI) of jasmonic acid receptor complex &... 0.03 OrthoFinder output from all 47 species
Dde_g01652 AFB2 substrate adaptor of SCF E3 ubiquitin ligase *(TIR1/AFB)... 0.02 OrthoFinder output from all 47 species
GSVIVT01033011001 AFB2 Protein degradation.peptide tagging.Ubiquitin... 0.02 OrthoFinder output from all 47 species
Gb_41378 COI1 Coronatine-insensitive protein homolog 1a OS=Oryza... 0.02 OrthoFinder output from all 47 species
Lfl_g03292 COI1 component *(COI) of jasmonic acid receptor complex &... 0.03 OrthoFinder output from all 47 species
MA_100849g0020 TIR1 F-box protein FBX14 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
MA_10427099g0010 COI1 Coronatine-insensitive protein homolog 1b OS=Oryza... 0.02 OrthoFinder output from all 47 species
Tin_g10047 AFB2 substrate adaptor of SCF E3 ubiquiTin ligase *(TIR1/AFB)... 0.02 OrthoFinder output from all 47 species
Zm00001e000649_P001 Zm00001e000649 component TIR1/AFB of auxin receptor complex. component... 0.02 OrthoFinder output from all 47 species
Zm00001e031742_P001 COI1, Zm00001e031742 component COI of jasmonic acid receptor complex 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEP HCCA
InterPro domains Description Start Stop
IPR041101 Transp_inhibit 196 241
IPR041567 COI1_F-box 136 175
No external refs found!