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  5. Sam_g38865

Sam_g38865


Description : not classified & original description: none


Gene families : OG0002035 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002035_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g38865
Cluster HCCA: Cluster_7

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00027p00217960 evm_27.TU.AmTr_v1... Rhodanese-like domain-containing protein 14,... 0.1 OrthoFinder output from all 47 species
AT4G27700 No alias Rhodanese/Cell cycle control phosphatase superfamily protein 0.08 OrthoFinder output from all 47 species
Adi_g020179 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aev_g11711 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g16181 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g17414 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g01147 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0047.g030254 No alias not classified & original description: CDS=115-861 0.03 OrthoFinder output from all 47 species
Ceric.11G085200.1 Ceric.11G085200 not classified & original description: pacid=50595665... 0.09 OrthoFinder output from all 47 species
Cre02.g111450 No alias No description available 0.14 OrthoFinder output from all 47 species
Cre16.g650050 No alias Rhodanese-like domain-containing protein 14,... 0.05 OrthoFinder output from all 47 species
Dde_g09713 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g22131 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01038606001 No alias Rhodanese-like domain-containing protein 14,... 0.04 OrthoFinder output from all 47 species
LOC_Os09g36040.1 LOC_Os09g36040 Rhodanese-like domain-containing protein 14,... 0.08 OrthoFinder output from all 47 species
Len_g02673 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g00978 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
MA_85383g0010 No alias Rhodanese-like domain-containing protein 14,... 0.08 OrthoFinder output from all 47 species
Mp3g12160.1 No alias Rhodanese-like domain-containing protein 14,... 0.05 OrthoFinder output from all 47 species
Nbi_g02721 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g03983 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g01836 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Ore_g05857 No alias not classified & original description: none 0.11 OrthoFinder output from all 47 species
Ore_g35161 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g08397 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g08526 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g09078 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Smo174737 No alias Rhodanese-like domain-containing protein 14,... 0.05 OrthoFinder output from all 47 species
Smo417803 No alias No description available 0.02 OrthoFinder output from all 47 species
Solyc06g053140.3.1 Solyc06g053140 Rhodanese-like domain-containing protein 14,... 0.13 OrthoFinder output from all 47 species
Spa_g13079 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g18946 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009522 photosystem I IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009538 photosystem I reaction center IEP HCCA
CC GO:0009654 photosystem II oxygen evolving complex IEP HCCA
MF GO:0015267 channel activity IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
CC GO:0019898 extrinsic component of membrane IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA
InterPro domains Description Start Stop
IPR001763 Rhodanese-like_dom 129 264
No external refs found!