Lfl_g29266


Description : helicase UAP56 & original description: none


Gene families : OG0002123 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002123_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Lfl_g29266
Cluster HCCA: Cluster_120

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00001376.20 No alias RNA processing.messenger ribonucleoprotein particle... 0.01 OrthoFinder output from all 47 species
Nbi_g34584 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g31414 No alias helicase UAP56 & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0003725 double-stranded RNA binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0006790 sulfur compound metabolic process IEP HCCA
BP GO:0016226 iron-sulfur cluster assembly IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
BP GO:0031163 metallo-sulfur cluster assembly IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
MF GO:0051287 NAD binding IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
InterPro domains Description Start Stop
IPR011545 DEAD/DEAH_box_helicase_dom 2 153
IPR001650 Helicase_C 193 300
No external refs found!