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  5. Sam_g39235

Sam_g39235


Description : not classified & original description: none


Gene families : OG0000378 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000378_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g39235
Cluster HCCA: Cluster_111

Target Alias Description ECC score Gene Family Method Actions
Als_g31913 DCL4, ATDCL4 endoribonuclease (DCL4) of transacting siRNA pathway &... 0.03 OrthoFinder output from all 47 species
Aspi01Gene47448.t2 DCL1, CAF,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g01358 DCL1, CAF,... endoribonuclease component *(DCL1) of DCL1-HYL1 miRNA... 0.05 OrthoFinder output from all 47 species
Dac_g33201 DCL4, ATDCL4 endoribonuclease (DCL4) of transacting siRNA pathway &... 0.02 OrthoFinder output from all 47 species
Dde_g08114 DCL4, ATDCL4 endoribonuclease (DCL4) of transacting siRNA pathway &... 0.02 OrthoFinder output from all 47 species
Ehy_g15817 DCL1, CAF,... endoribonuclease component *(DCL1) of DCL1-HYL1 miRNA... 0.02 OrthoFinder output from all 47 species
Ehy_g16399 ATDCL2, DCL2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g25122 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g37606 ATDCL3, DCL3 endoribonuclease (DCL2) of transacting siRNA pathway &... 0.02 OrthoFinder output from all 47 species
Ppi_g29457 DCL4, ATDCL4 endoribonuclease (DCL4) of transacting siRNA pathway &... 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0089.g018689 DCL1, CAF,... not classified & original description: CDS=1-1830 0.03 OrthoFinder output from all 47 species
Sam_g27643 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA

No InterPro domains available for this sequence

No external refs found!