Sam_g39978


Description : not classified & original description: none


Gene families : OG0001768 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001768_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g39978

Target Alias Description ECC score Gene Family Method Actions
Dac_g13786 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g20998 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g10584 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g01571 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g42796 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g02247 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0100.g019663 No alias not classified & original description: CDS=95-1378 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003690 double-stranded DNA binding IEP HCCA
MF GO:0004045 aminoacyl-tRNA hydrolase activity IEP HCCA
MF GO:0004066 asparagine synthase (glutamine-hydrolyzing) activity IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006298 mismatch repair IEP HCCA
BP GO:0006528 asparagine metabolic process IEP HCCA
BP GO:0006529 asparagine biosynthetic process IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
BP GO:0008652 amino acid biosynthetic process IEP HCCA
MF GO:0008658 penicillin binding IEP HCCA
BP GO:0009066 aspartate family amino acid metabolic process IEP HCCA
BP GO:0009067 aspartate family amino acid biosynthetic process IEP HCCA
BP GO:0016053 organic acid biosynthetic process IEP HCCA
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP HCCA
MF GO:0016884 carbon-nitrogen ligase activity, with glutamine as amido-N-donor IEP HCCA
MF GO:0030983 mismatched DNA binding IEP HCCA
MF GO:0031406 carboxylic acid binding IEP HCCA
MF GO:0033218 amide binding IEP HCCA
MF GO:0033293 monocarboxylic acid binding IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
MF GO:0043177 organic acid binding IEP HCCA
BP GO:0046394 carboxylic acid biosynthetic process IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
MF GO:0052689 carboxylic ester hydrolase activity IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
BP GO:1901605 alpha-amino acid metabolic process IEP HCCA
BP GO:1901607 alpha-amino acid biosynthetic process IEP HCCA
MF GO:1901681 sulfur compound binding IEP HCCA
InterPro domains Description Start Stop
IPR003734 DUF155 245 333
No external refs found!