Description : component *(cS23) of small plastid ribosomal-subunit proteome & original description: none
Gene families : OG0003343 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003343_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00010p00055110 | evm_27.TU.AmTr_v1... | Protein biosynthesis.organelle translation... | 0.02 | OrthoFinder output from all 47 species | |
| AT1G68590 | No alias | Ribosomal protein PSRP-3/Ycf65 | 0.02 | OrthoFinder output from all 47 species | |
| Ala_g09246 | No alias | component *(cS23) of small plastid ribosomal-subunit... | 0.06 | OrthoFinder output from all 47 species | |
| Aob_g07615 | No alias | component *(cS23) of small plastid ribosomal-subunit... | 0.02 | OrthoFinder output from all 47 species | |
| Aob_g08130 | No alias | component *(cS23) of small plastid ribosomal-subunit... | 0.02 | OrthoFinder output from all 47 species | |
| Aob_g18441 | No alias | component *(cS23) of small plastid ribosomal-subunit... | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g18177 | No alias | component *(cS23) of small plastid ribosomal-subunit... | 0.05 | OrthoFinder output from all 47 species | |
| Cre02.g083950 | No alias | Protein biosynthesis.organelle translation... | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01031053001 | No alias | Protein biosynthesis.organelle translation... | 0.03 | OrthoFinder output from all 47 species | |
| Mp2g13520.1 | No alias | component psPSRP3 of small ribosomal subunit proteome | 0.01 | OrthoFinder output from all 47 species | |
| Ppi_g18636 | No alias | component *(cS23) of small plastid ribosomal-subunit... | 0.04 | OrthoFinder output from all 47 species | |
| Spa_g06637 | No alias | component *(cS23) of small plastid ribosomal-subunit... | 0.04 | OrthoFinder output from all 47 species | |
| Tin_g12630 | No alias | component *(cS23) of small plastid ribosomal-subunit... | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003735 | structural constituent of ribosome | IEA | Interproscan |
| CC | GO:0005840 | ribosome | IEA | Interproscan |
| BP | GO:0006412 | translation | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003690 | double-stranded DNA binding | IEP | HCCA |
| MF | GO:0003824 | catalytic activity | IEP | HCCA |
| MF | GO:0005488 | binding | IEP | HCCA |
| BP | GO:0015969 | guanosine tetraphosphate metabolic process | IEP | HCCA |
| MF | GO:0016491 | oxidoreductase activity | IEP | HCCA |
| MF | GO:0016747 | acyltransferase activity, transferring groups other than amino-acyl groups | IEP | HCCA |
| MF | GO:0032977 | membrane insertase activity | IEP | HCCA |
| BP | GO:0033865 | nucleoside bisphosphate metabolic process | IEP | HCCA |
| BP | GO:0033875 | ribonucleoside bisphosphate metabolic process | IEP | HCCA |
| BP | GO:0034032 | purine nucleoside bisphosphate metabolic process | IEP | HCCA |
| BP | GO:0034035 | purine ribonucleoside bisphosphate metabolic process | IEP | HCCA |
| MF | GO:0051536 | iron-sulfur cluster binding | IEP | HCCA |
| MF | GO:0051540 | metal cluster binding | IEP | HCCA |
| MF | GO:0097159 | organic cyclic compound binding | IEP | HCCA |
| MF | GO:0140104 | molecular carrier activity | IEP | HCCA |
| MF | GO:0140597 | protein carrier chaperone | IEP | HCCA |
| MF | GO:1901363 | heterocyclic compound binding | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR006924 | Ribosomal_PSRP3/Ycf65 | 858 | 904 |
| No external refs found! |
