Sam_g40307


Description : not classified & original description: none


Gene families : OG0000543 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000543_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g40307
Cluster HCCA: Cluster_36

Target Alias Description ECC score Gene Family Method Actions
Aop_g38102 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.24G005100.1 Ceric.24G005100 not classified & original description: pacid=50628455... 0.03 OrthoFinder output from all 47 species
Gb_37467 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Msp_g40309 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0268.g026986 No alias not classified & original description: CDS=193-879 0.03 OrthoFinder output from all 47 species
Zm00001e030507_P001 Zm00001e030507 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0010333 terpene synthase activity IEP HCCA
MF GO:0016829 lyase activity IEP HCCA
MF GO:0016835 carbon-oxygen lyase activity IEP HCCA
MF GO:0016838 carbon-oxygen lyase activity, acting on phosphates IEP HCCA
MF GO:0030599 pectinesterase activity IEP HCCA
BP GO:0042545 cell wall modification IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
MF GO:0046983 protein dimerization activity IEP HCCA
MF GO:0052689 carboxylic ester hydrolase activity IEP HCCA
BP GO:0071554 cell wall organization or biogenesis IEP HCCA
BP GO:0071555 cell wall organization IEP HCCA
InterPro domains Description Start Stop
IPR008889 VQ 71 89
No external refs found!