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  5. Sam_g40584

Sam_g40584


Description : not classified & original description: none


Gene families : OG0000143 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000143_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g40584

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00099p00034070 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
AT2G39650 No alias Protein of unknown function (DUF506) 0.03 OrthoFinder output from all 47 species
Als_g36969 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g37115 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g31132 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g09470 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g63912 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene27252.t1 Aspi01Gene27252 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0006.g010379 No alias not classified & original description: CDS=290-1537 0.03 OrthoFinder output from all 47 species
Azfi_s0035.g025546 No alias not classified & original description: CDS=508-1674 0.03 OrthoFinder output from all 47 species
Azfi_s0038.g026352 No alias not classified & original description: CDS=79-1266 0.02 OrthoFinder output from all 47 species
Cba_g30213 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.01G087300.1 Ceric.01G087300 not classified & original description: pacid=50591762... 0.02 OrthoFinder output from all 47 species
Ceric.38G028700.1 Ceric.38G028700 not classified & original description: pacid=50579312... 0.02 OrthoFinder output from all 47 species
Dde_g29952 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g02508 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01005210001 No alias No description available 0.02 OrthoFinder output from all 47 species
GSVIVT01006248001 No alias No description available 0.04 OrthoFinder output from all 47 species
GSVIVT01020560001 No alias No description available 0.02 OrthoFinder output from all 47 species
Gb_09444 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os10g28210.1 LOC_Os10g28210 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Len_g09336 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g29070 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
MA_132127g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_41471g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Ore_g09998 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g29263 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g37706 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g35478 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g08409 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g10620 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g41587 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0006.g003040 No alias not classified & original description: CDS=1-1485 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0055.g014461 No alias not classified & original description: CDS=1-1647 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0106.g020224 No alias not classified & original description: CDS=806-2086 0.05 OrthoFinder output from all 47 species
Sam_g47873 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc02g078160.3.1 Solyc02g078160 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Solyc06g005480.3.1 Solyc06g005480 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Solyc06g007580.1.1 Solyc06g007580 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Spa_g41694 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0006813 potassium ion transport IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
MF GO:0015079 potassium ion transmembrane transporter activity IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0030001 metal ion transport IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
MF GO:0046873 metal ion transmembrane transporter activity IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0071805 potassium ion transmembrane transport IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR006502 PDDEXK-like 127 350
No external refs found!