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  5. Sam_g40596

Sam_g40596


Description : EC_4.3 carbon-nitrogen lyase & original description: none


Gene families : OG0000347 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000347_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g40596

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00149p00021810 SSL3,... Enzyme classification.EC_4 lyases.EC_4.3 carbon-nitrogen lyase 0.02 OrthoFinder output from all 47 species
AT1G74020 SS2 strictosidine synthase 2 0.03 OrthoFinder output from all 47 species
Adi_g018862 No alias EC_4.3 carbon-nitrogen lyase & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g05812 No alias EC_4.3 carbon-nitrogen lyase & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g01808 SSL3 EC_4.3 carbon-nitrogen lyase & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g03359 No alias EC_4.3 carbon-nitrogen lyase & original description: none 0.03 OrthoFinder output from all 47 species
Als_g15853 SSL3 EC_4.3 carbon-nitrogen lyase & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene41206.t1 Aspi01Gene41206 EC_4.3 carbon-nitrogen lyase & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene48272.t2 Aspi01Gene48272 EC_4.3 carbon-nitrogen lyase & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene49204.t1 Aspi01Gene49204 EC_4.3 carbon-nitrogen lyase & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene63166.t1 Aspi01Gene63166 EC_4.3 carbon-nitrogen lyase & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.28G040300.1 Ceric.28G040300 EC_4.3 carbon-nitrogen lyase & original description:... 0.02 OrthoFinder output from all 47 species
Dac_g12699 No alias EC_4.3 carbon-nitrogen lyase & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g00936 No alias EC_4.3 carbon-nitrogen lyase & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g10876 No alias EC_4.3 carbon-nitrogen lyase & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g16489 SSL3 EC_4.3 carbon-nitrogen lyase & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01034422001 No alias Enzyme classification.EC_4 lyases.EC_4.3 carbon-nitrogen... 0.01 OrthoFinder output from all 47 species
Len_g27126 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g00549 No alias EC_4.3 carbon-nitrogen lyase & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g47278 No alias EC_4.3 carbon-nitrogen lyase & original description: none 0.01 OrthoFinder output from all 47 species
Ore_g32641 No alias EC_4.3 carbon-nitrogen lyase & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g09839 No alias EC_4.3 carbon-nitrogen lyase & original description: none 0.02 OrthoFinder output from all 47 species
Solyc06g073910.4.1 SSL3, Solyc06g073910 Protein STRICTOSIDINE SYNTHASE-LIKE 3 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Tin_g12342 No alias EC_4.3 carbon-nitrogen lyase & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g14975 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e033989_P001 Zm00001e033989 Enzyme classification.EC_4 lyases.EC_4.3 carbon-nitrogen... 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0009058 biosynthetic process IEA Interproscan
MF GO:0016844 strictosidine synthase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004134 4-alpha-glucanotransferase activity IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
InterPro domains Description Start Stop
IPR018119 Strictosidine_synth_cons-reg 203 289
No external refs found!