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  5. Sam_g40941

Sam_g40941


Description : subunit c of V-type ATPase membrane V0 subcomplex & original description: none


Gene families : OG0000979 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000979_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g40941
Cluster HCCA: Cluster_145

Target Alias Description ECC score Gene Family Method Actions
Adi_g012522 No alias subunit c of V-type ATPase membrane V0 subcomplex &... 0.02 OrthoFinder output from all 47 species
Adi_g051491 No alias subunit c of V-type ATPase membrane V0 subcomplex &... 0.04 OrthoFinder output from all 47 species
Lfl_g07984 AVA-2PE, AVA-P2, ATVHA-C2 subunit c of V-type ATPase membrane V0 subcomplex &... 0.04 OrthoFinder output from all 47 species
Tin_g05865 No alias subunit c of V-type ATPase membrane V0 subcomplex &... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0015078 proton transmembrane transporter activity IEA Interproscan
CC GO:0033177 proton-transporting two-sector ATPase complex, proton-transporting domain IEA Interproscan
BP GO:1902600 proton transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000723 telomere maintenance IEP HCCA
MF GO:0003678 DNA helicase activity IEP HCCA
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
CC GO:0005759 mitochondrial matrix IEP HCCA
CC GO:0005840 ribosome IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
CC GO:0031974 membrane-enclosed lumen IEP HCCA
BP GO:0032200 telomere organization IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
CC GO:0043233 organelle lumen IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
CC GO:0070013 intracellular organelle lumen IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR002379 ATPase_proteolipid_c-like_dom 132 190
IPR002379 ATPase_proteolipid_c-like_dom 52 111
No external refs found!