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  5. Sam_g40989

Sam_g40989


Description : not classified & original description: none


Gene families : OG0000028 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g40989
Cluster HCCA: Cluster_117

Target Alias Description ECC score Gene Family Method Actions
AT2G44490 PEN2, BGLU26 Glycosyl hydrolase superfamily protein 0.04 OrthoFinder output from all 47 species
Aev_g44404 BGLU42 EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
Als_g47528 BGLU40 EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene24294.t1 BGLU40, Aspi01Gene24294 EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0002.g001461 BGLU45 not classified & original description: CDS=1-360 0.03 OrthoFinder output from all 47 species
Cba_g26809 BGLU42 EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g03327 BGLU42 EC_3.2 glycosylase & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g22053 BGLU40 EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g29473 BGLU40 EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g30965 BGLU40 EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g30562 BGLU40 EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g18997 BGLU41 EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g12168 BGLU40 EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g60428 BGLU42 EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g25022 No alias EC_3.2 glycosylase & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEA Interproscan
BP GO:0005975 carbohydrate metabolic process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004252 serine-type endopeptidase activity IEP HCCA
MF GO:0005216 monoatomic ion channel activity IEP HCCA
BP GO:0006465 signal peptide processing IEP HCCA
BP GO:0006811 monoatomic ion transport IEP HCCA
BP GO:0007165 signal transduction IEP HCCA
MF GO:0008236 serine-type peptidase activity IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0015267 channel activity IEP HCCA
BP GO:0016485 protein processing IEP HCCA
MF GO:0017171 serine hydrolase activity IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051604 protein maturation IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
InterPro domains Description Start Stop
IPR001360 Glyco_hydro_1 1 32
No external refs found!