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  5. Sam_g45259

Sam_g45259


Description : component *(eL18) of large ribosomal-subunit (LSU) proteome & original description: none


Gene families : OG0001263 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001263_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g45259
Cluster HCCA: Cluster_66

Target Alias Description ECC score Gene Family Method Actions
Als_g30283 RPL18 component *(eL18) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
Aop_g11456 RPL18 component *(eL18) of large ribosomal-subunit (LSU)... 0.04 OrthoFinder output from all 47 species
Azfi_s0090.g042750 No alias component *(eL18) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000142.18 RPL18 60S ribosomal protein L18 (Fragment) OS=Cicer arietinum 0.05 OrthoFinder output from all 47 species
Cre12.g512600 RPL18 Protein biosynthesis.cytosolic ribosome.large subunit... 0.03 OrthoFinder output from all 47 species
Dcu_g41478 RPL18 component *(eL18) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Ehy_g03208 No alias component *(eL18) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
GSVIVT01031168001 RPL18 Protein biosynthesis.cytosolic ribosome.large subunit... 0.04 OrthoFinder output from all 47 species
LOC_Os05g06310.1 LOC_Os05g06310 component RPL18 of LSU proteome component 0.01 OrthoFinder output from all 47 species
Mp1g22500.1 No alias component RPL18 of LSU proteome component 0.04 OrthoFinder output from all 47 species
Nbi_g06518 RPL18 component *(eL18) of large ribosomal-subunit (LSU)... 0.04 OrthoFinder output from all 47 species
Pp3c1_5330V3.1 RPL18, Pp3c1_5330 ribosomal protein L18 0.01 OrthoFinder output from all 47 species
Pp3c2_32510V3.1 RPL18, Pp3c2_32510 ribosomal protein L18 0.01 OrthoFinder output from all 47 species
Pp3c7_22030V3.1 RPL18, Pp3c7_22030 ribosomal protein L18 0.01 OrthoFinder output from all 47 species
Ppi_g02625 RPL18 component *(eL18) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Ppi_g56097 RPL18 component *(eL18) of large ribosomal-subunit (LSU)... 0.08 OrthoFinder output from all 47 species
Sacu_v1.1_s0076.g017487 RPL18 component *(eL18) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Sam_g06147 No alias component *(eL18) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
Smo267976 RPL18 Protein biosynthesis.cytosolic ribosome.large subunit... 0.02 OrthoFinder output from all 47 species
Solyc09g075290.3.1 RPL18, Solyc09g075290 component RPL18 of LSU proteome component 0.03 OrthoFinder output from all 47 species
Spa_g19308 RPL18 component *(eL18) of large ribosomal-subunit (LSU)... 0.05 OrthoFinder output from all 47 species
Spa_g21425 RPL18 component *(eL18) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Zm00001e026750_P001 Zm00001e026750 component RPL18 of LSU proteome component 0.05 OrthoFinder output from all 47 species
Zm00001e031155_P001 Zm00001e031155 component RPL18 of LSU proteome component 0.04 OrthoFinder output from all 47 species
Zm00001e035836_P001 Zm00001e035836 component RPL18 of LSU proteome component 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0004129 cytochrome-c oxidase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
BP GO:0006091 generation of precursor metabolites and energy IEP HCCA
MF GO:0008324 monoatomic cation transmembrane transporter activity IEP HCCA
MF GO:0009055 electron transfer activity IEP HCCA
BP GO:0009060 aerobic respiration IEP HCCA
MF GO:0015075 monoatomic ion transmembrane transporter activity IEP HCCA
MF GO:0015078 proton transmembrane transporter activity IEP HCCA
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP HCCA
MF GO:0015399 primary active transmembrane transporter activity IEP HCCA
MF GO:0015453 oxidoreduction-driven active transmembrane transporter activity IEP HCCA
BP GO:0015980 energy derivation by oxidation of organic compounds IEP HCCA
MF GO:0016675 oxidoreductase activity, acting on a heme group of donors IEP HCCA
MF GO:0019843 rRNA binding IEP HCCA
MF GO:0020037 heme binding IEP HCCA
MF GO:0022804 active transmembrane transporter activity IEP HCCA
MF GO:0022853 active monoatomic ion transmembrane transporter activity IEP HCCA
MF GO:0022890 inorganic cation transmembrane transporter activity IEP HCCA
BP GO:0045333 cellular respiration IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR021131 Ribosomal_L18e/L15P 1 119
No external refs found!