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  5. Sam_g46664

Sam_g46664


Description : EC_5.2 cis-trans-isomerase & original description: none


Gene families : OG0000219 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000219_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g46664
Cluster HCCA: Cluster_120

Target Alias Description ECC score Gene Family Method Actions
AT4G38740 ROC1 rotamase CYP 1 0.01 OrthoFinder output from all 47 species
Aev_g00578 No alias EC_5.2 cis-trans-isomerase & original description: none 0.02 OrthoFinder output from all 47 species
Als_g45929 ROC7 EC_5.2 cis-trans-isomerase & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g01969 ROC2 EC_5.2 cis-trans-isomerase & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g05987 No alias EC_5.2 cis-trans-isomerase & original description: none 0.02 OrthoFinder output from all 47 species
Cre12.g544114 ATCYP20-2, CYP20-2 Protein modification.protein folding and quality... 0.01 OrthoFinder output from all 47 species
LOC_Os01g18210.1 ROC4, LOC_Os01g18210 protein folding catalyst 0.02 OrthoFinder output from all 47 species
Lfl_g00574 ROC2 EC_5.2 cis-trans-isomerase & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g00356 ROC2 EC_5.2 cis-trans-isomerase & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g04699 ATCYP20-2, CYP20-2 EC_5.2 cis-trans-isomerase & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g21010 No alias EC_5.2 cis-trans-isomerase & original description: none 0.03 OrthoFinder output from all 47 species
Pp3c13_5300V3.1 ATCYP20-2,... cyclophilin 20-2 0.01 OrthoFinder output from all 47 species
Spa_g00177 ROC2 EC_5.2 cis-trans-isomerase & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g29336 ATCYP20-2, CYP20-2 EC_5.2 cis-trans-isomerase & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEA Interproscan
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003779 actin binding IEP HCCA
MF GO:0004180 carboxypeptidase activity IEP HCCA
MF GO:0004185 serine-type carboxypeptidase activity IEP HCCA
MF GO:0004601 peroxidase activity IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0006644 phospholipid metabolic process IEP HCCA
BP GO:0006979 response to oxidative stress IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0007010 cytoskeleton organization IEP HCCA
MF GO:0008238 exopeptidase activity IEP HCCA
BP GO:0008610 lipid biosynthetic process IEP HCCA
BP GO:0008654 phospholipid biosynthetic process IEP HCCA
MF GO:0016209 antioxidant activity IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP HCCA
MF GO:0016780 phosphotransferase activity, for other substituted phosphate groups IEP HCCA
MF GO:0016872 intramolecular lyase activity IEP HCCA
MF GO:0035673 oligopeptide transmembrane transporter activity IEP HCCA
MF GO:0042887 amide transmembrane transporter activity IEP HCCA
BP GO:0044255 cellular lipid metabolic process IEP HCCA
MF GO:0051087 chaperone binding IEP HCCA
MF GO:0070008 serine-type exopeptidase activity IEP HCCA
MF GO:1904680 peptide transmembrane transporter activity IEP HCCA
InterPro domains Description Start Stop
IPR002130 Cyclophilin-type_PPIase_dom 78 238
No external refs found!