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  5. Sam_g46806

Sam_g46806


Description : component *(bL31c) of large plastid ribosomal-subunit proteome & original description: none


Gene families : OG0005954 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005954_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g46806

Target Alias Description ECC score Gene Family Method Actions
AT1G75350 emb2184 Ribosomal protein L31 0.08 OrthoFinder output from all 47 species
Als_g09129 emb2184 component *(bL31c) of large plastid ribosomal-subunit... 0.04 OrthoFinder output from all 47 species
Aob_g33625 emb2184 component *(bL31c) of large plastid ribosomal-subunit... 0.03 OrthoFinder output from all 47 species
Aop_g39319 emb2184 component *(bL31c) of large plastid ribosomal-subunit... 0.09 OrthoFinder output from all 47 species
Azfi_s0288.g063251 emb2184 component *(bL31c) of large plastid ribosomal-subunit... 0.04 OrthoFinder output from all 47 species
Ceric.01G009700.1 emb2184, Ceric.01G009700 component *(bL31c) of large plastid ribosomal-subunit... 0.06 OrthoFinder output from all 47 species
Cre08.g365400 emb2184 Protein biosynthesis.organelle translation... 0.06 OrthoFinder output from all 47 species
Dcu_g09395 emb2184 component *(bL31c) of large plastid ribosomal-subunit... 0.08 OrthoFinder output from all 47 species
Dde_g22510 emb2184 component *(bL31c) of large plastid ribosomal-subunit... 0.06 OrthoFinder output from all 47 species
Ehy_g22754 emb2184 component *(bL31c) of large plastid ribosomal-subunit... 0.08 OrthoFinder output from all 47 species
GSVIVT01009748001 emb2184 Protein biosynthesis.organelle translation... 0.02 OrthoFinder output from all 47 species
LOC_Os01g44210.1 emb2184, LOC_Os01g44210 component psRPL31 of large ribosomal subunit proteome 0.04 OrthoFinder output from all 47 species
Len_g07156 emb2184 component *(bL31c) of large plastid ribosomal-subunit... 0.09 OrthoFinder output from all 47 species
Lfl_g27173 emb2184 component *(bL31c) of large plastid ribosomal-subunit... 0.03 OrthoFinder output from all 47 species
MA_10430444g0010 emb2184 component psRPL31 of large ribosomal subunit proteome 0.03 OrthoFinder output from all 47 species
Mp7g17190.1 emb2184 component psRPL31 of large ribosomal subunit proteome 0.13 OrthoFinder output from all 47 species
Ore_g28539 emb2184 component *(bL31c) of large plastid ribosomal-subunit... 0.03 OrthoFinder output from all 47 species
Pnu_g19124 emb2184 component *(bL31c) of large plastid ribosomal-subunit... 0.03 OrthoFinder output from all 47 species
Pp3c4_22510V3.1 emb2184, Pp3c4_22510 Ribosomal protein L31 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0050.g013860 emb2184 component *(bL31c) of large plastid ribosomal-subunit... 0.03 OrthoFinder output from all 47 species
Solyc04g080630.4.1 emb2184, Solyc04g080630 component psRPL31 of large ribosomal subunit proteome 0.04 OrthoFinder output from all 47 species
Spa_g16064 emb2184 component *(bL31c) of large plastid ribosomal-subunit... 0.03 OrthoFinder output from all 47 species
Tin_g17383 emb2184 component *(bL31c) of large plastid ribosomal-subunit... 0.02 OrthoFinder output from all 47 species
Zm00001e020389_P001 emb2184, Zm00001e020389 component psRPL31 of large ribosomal subunit proteome 0.07 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
MF GO:0016209 antioxidant activity IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
MF GO:0050660 flavin adenine dinucleotide binding IEP HCCA
MF GO:0071949 FAD binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR002150 Ribosomal_L31 51 115
No external refs found!