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  5. Sam_g46845

Sam_g46845


Description : EC_4.2 carbon-oxygen lyase & original description: none


Gene families : OG0000437 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000437_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g46845
Cluster HCCA: Cluster_33

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00031p00113450 CAH1, ACA1,... Enzyme classification.EC_4 lyases.EC_4.2 carbon-oxygen lyase 0.03 OrthoFinder output from all 47 species
AMTR_s00053p00197030 ACA4, ATACA4,... Enzyme classification.EC_4 lyases.EC_4.2 carbon-oxygen lyase 0.03 OrthoFinder output from all 47 species
AMTR_s00157p00083130 ATACA7, ACA7,... Alpha carbonic anhydrase 7 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
AT3G52720 CAH1, ACA1, ATACA1 alpha carbonic anhydrase 1 0.02 OrthoFinder output from all 47 species
AT5G04180 ATACA3, ACA3 alpha carbonic anhydrase 3 0.04 OrthoFinder output from all 47 species
Ala_g25139 ATACA7, ACA7 EC_4.2 carbon-oxygen lyase & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01033673001 ATACA7, ACA7 Alpha carbonic anhydrase 7 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
LOC_Os08g32840.1 ATACA7, ACA7,... Alpha carbonic anhydrase 7 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
LOC_Os09g28150.1 ATACA2, ACA2,... Alpha carbonic anhydrase 2 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
LOC_Os11g05510.1 ATACA3, ACA3,... no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os11g05520.1 CAH1, ACA1,... Alpha carbonic anhydrase 1, chloroplastic OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
MA_92682g0010 ACA4, ATACA4 Alpha carbonic anhydrase 4 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Ore_g42745 ATACA2, ACA2 EC_4.2 carbon-oxygen lyase & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g42746 ATACA2, ACA2 EC_4.2 carbon-oxygen lyase & original description: none 0.02 OrthoFinder output from all 47 species
Pp3c7_9420V3.1 ATACA7, ACA7, Pp3c7_9420 alpha carbonic anhydrase 7 0.01 OrthoFinder output from all 47 species
Pp3c7_9520V3.1 ATACA7, ACA7, Pp3c7_9520 alpha carbonic anhydrase 7 0.01 OrthoFinder output from all 47 species
Pp3c7_9540V3.1 ATACA7, ACA7, Pp3c7_9540 alpha carbonic anhydrase 7 0.02 OrthoFinder output from all 47 species
Pp3c7_9610V3.1 ATACA7, ACA7, Pp3c7_9610 alpha carbonic anhydrase 7 0.01 OrthoFinder output from all 47 species
Pp3c7_9630V3.1 ATACA7, ACA7, Pp3c7_9630 alpha carbonic anhydrase 7 0.01 OrthoFinder output from all 47 species
Solyc10g079270.3.1 ACA4, ATACA4,... Alpha carbonic anhydrase 4 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Solyc10g083890.2.1 ATACA7, ACA7,... Alpha carbonic anhydrase 7 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Spa_g03614 ACA4, ATACA4 EC_4.2 carbon-oxygen lyase & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000096 sulfur amino acid metabolic process IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004489 methylenetetrahydrofolate reductase (NAD(P)H) activity IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0006555 methionine metabolic process IEP HCCA
BP GO:0006790 sulfur compound metabolic process IEP HCCA
BP GO:0009066 aspartate family amino acid metabolic process IEP HCCA
MF GO:0016645 oxidoreductase activity, acting on the CH-NH group of donors IEP HCCA
MF GO:0016646 oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
BP GO:1901605 alpha-amino acid metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR001148 CA_dom 109 328
No external refs found!