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  5. Lfl_g30075

Lfl_g30075 (CRF3)


Aliases : CRF3

Description : subgroup ERF-VI transcription factor & original description: none


Gene families : OG0000003 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Lfl_g30075

Target Alias Description ECC score Gene Family Method Actions
AT2G25820 No alias Integrase-type DNA-binding superfamily protein 0.03 OrthoFinder output from all 47 species
AT2G47520 HRE2 Integrase-type DNA-binding superfamily protein 0.02 OrthoFinder output from all 47 species
AT3G14230 RAP2.2 related to AP2 2 0.03 OrthoFinder output from all 47 species
AT5G61590 No alias Integrase-type DNA-binding superfamily protein 0.05 OrthoFinder output from all 47 species
Adi_g079001 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g28072 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g00575 No alias cutin and suberin biosynthesis transcription factor... 0.03 OrthoFinder output from all 47 species
Aob_g42576 DEAR4, RAP2.10 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g42816 ERF-1, ATERF-1 subgroup ERF-IX transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene32060.t1 Aspi01Gene32060 subgroup ERF-IX transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.19G028400.1 HRE2, Ceric.19G028400 not classified & original description: pacid=50576636... 0.04 OrthoFinder output from all 47 species
Dcu_g08328 LEP not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g06699 Rap2.6L not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g14006 ATERF-9, ERF9, ATERF9 subgroup ERF-VIII transcription factor & original... 0.03 OrthoFinder output from all 47 species
GSVIVT01022277001 ABR1 RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 OrthoFinder output from all 47 species
GSVIVT01034563001 ERF110 RNA biosynthesis.transcriptional activation.AP2/ERF... 0.04 OrthoFinder output from all 47 species
Gb_17122 No alias transcription factor (DREB) 0.03 OrthoFinder output from all 47 species
LOC_Os01g73770.1 CBF4, DREB1D,... transcription factor (DREB) 0.04 OrthoFinder output from all 47 species
LOC_Os03g64260.1 ERF1, ATERF1,... transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
LOC_Os04g46220.1 ERF-1, ATERF-1,... transcription factor (ERF) 0.01 OrthoFinder output from all 47 species
LOC_Os08g36920.1 RRTF1, LOC_Os08g36920 transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
LOC_Os12g39330.1 RAP2.11, LOC_Os12g39330 transcription factor (ERF). transcription factor (ERN1) 0.03 OrthoFinder output from all 47 species
MA_938274g0010 ERF-1, ATERF-1 transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
Mp2g11080.1 HRE2 transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
Solyc01g008890.4.1 CRF4, Solyc01g008890 transcription factor (ERF) 0.03 OrthoFinder output from all 47 species
Solyc10g076380.2.1 DREB19, Solyc10g076380 transcription factor (DREB) 0.11 OrthoFinder output from all 47 species
Solyc12g049560.2.1 RAP2.2, Solyc12g049560 transcription factor (ERF) 0.03 OrthoFinder output from all 47 species
Zm00001e000608_P002 Rap2.6L, Zm00001e000608 Ethylene-responsive transcription factor ERF073... 0.02 OrthoFinder output from all 47 species
Zm00001e014413_P001 Zm00001e014413 transcription factor (DREB) 0.05 OrthoFinder output from all 47 species
Zm00001e015968_P001 Zm00001e015968 transcription factor (DREB) 0.04 OrthoFinder output from all 47 species
Zm00001e017516_P001 HRE2, Zm00001e017516 transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
Zm00001e026192_P001 HRE2, Zm00001e026192 transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
Zm00001e035837_P001 ERF72, EBP,... transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
Zm00001e036201_P001 Zm00001e036201 Ethylene-responsive transcription factor ERF014... 0.02 OrthoFinder output from all 47 species
Zm00001e036260_P001 RAP2.12, Zm00001e036260 transcription factor (ERF) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA Interproscan
BP GO:0006355 regulation of DNA-templated transcription IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0009892 negative regulation of metabolic process IEP HCCA
BP GO:0010215 cellulose microfibril organization IEP HCCA
BP GO:0010605 negative regulation of macromolecule metabolic process IEP HCCA
BP GO:0010629 negative regulation of gene expression IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
BP GO:0030198 extracellular matrix organization IEP HCCA
BP GO:0031047 RNA-mediated gene silencing IEP HCCA
BP GO:0043062 extracellular structure organization IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
BP GO:0048519 negative regulation of biological process IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR001471 AP2/ERF_dom 177 226
No external refs found!