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  5. Sam_g48237

Sam_g48237


Description : not classified & original description: none


Gene families : OG0000526 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000526_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g48237

Target Alias Description ECC score Gene Family Method Actions
AT3G48940 No alias Remorin family protein 0.04 OrthoFinder output from all 47 species
AT5G23750 No alias Remorin family protein 0.02 OrthoFinder output from all 47 species
Aev_g25241 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g70234 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Azfi_s0129.g048972 No alias not classified & original description: CDS=564-1205 0.05 OrthoFinder output from all 47 species
Azfi_s0217.g058560 No alias not classified & original description: CDS=1-231 0.04 OrthoFinder output from all 47 species
Ceric.04G101900.1 Ceric.04G101900 not classified & original description: pacid=50631891... 0.03 OrthoFinder output from all 47 species
Ceric.06G045700.1 Ceric.06G045700 not classified & original description: pacid=50619672... 0.06 OrthoFinder output from all 47 species
Ceric.11G018300.1 Ceric.11G018300 not classified & original description: pacid=50595329... 0.04 OrthoFinder output from all 47 species
Ceric.14G035300.1 Ceric.14G035300 not classified & original description: pacid=50633681... 0.03 OrthoFinder output from all 47 species
Ceric.33G027200.1 Ceric.33G027200 not classified & original description: pacid=50607254... 0.02 OrthoFinder output from all 47 species
Ceric.35G046700.1 Ceric.35G046700 not classified & original description: pacid=50581722... 0.03 OrthoFinder output from all 47 species
Dcu_g42996 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g48279 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
GSVIVT01019785001 No alias Remorin OS=Solanum tuberosum 0.04 OrthoFinder output from all 47 species
GSVIVT01028980001 No alias Remorin OS=Solanum tuberosum 0.02 OrthoFinder output from all 47 species
Gb_30703 No alias Remorin OS=Solanum tuberosum (sp|p93788|remo_soltu : 83.2) 0.01 OrthoFinder output from all 47 species
LOC_Os10g36000.1 LOC_Os10g36000 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Len_g01012 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Len_g05082 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g08631 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g23734 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g57392 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g06649 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g43674 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g43675 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g05160 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g16515 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g35103 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g41088 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g41173 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g45215 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g15851 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g06625 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g06776 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g08904 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0013.g005937 No alias not classified & original description: CDS=1-372 0.03 OrthoFinder output from all 47 species
Solyc06g035900.1.1 Solyc06g035900 no hits & (original description: none) 0.01 OrthoFinder output from all 47 species
Solyc10g017540.4.1 Solyc10g017540 Remorin OS=Solanum tuberosum (sp|p93788|remo_soltu : 95.1) 0.03 OrthoFinder output from all 47 species
Spa_g08097 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g38180 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g47427 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e015240_P001 Zm00001e015240 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003682 chromatin binding IEP HCCA
MF GO:0004601 peroxidase activity IEP HCCA
BP GO:0006979 response to oxidative stress IEP HCCA
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP HCCA
MF GO:0046983 protein dimerization activity IEP HCCA
InterPro domains Description Start Stop
IPR005516 Remorin_C 69 179
No external refs found!