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  5. Lfl_g30198

Lfl_g30198 (ATCXE12, CXE12)


Aliases : ATCXE12, CXE12

Description : not classified & original description: none


Gene families : OG0000050 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Lfl_g30198

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00110p00041000 CXE17, AtCXE17,... Probable carboxylesterase 17 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AT1G68620 No alias alpha/beta-Hydrolases superfamily protein 0.03 OrthoFinder output from all 47 species
AT5G16080 CXE17, AtCXE17 carboxyesterase 17 0.02 OrthoFinder output from all 47 species
Adi_g010840 ATGID1C, GID1C not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g114474 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g02964 AtCXE16, CXE16 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene40308.t1 CXE17, AtCXE17,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g25765 CXE17, AtCXE17 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.14G006300.1 CXE17, AtCXE17,... not classified & original description: pacid=50633795... 0.03 OrthoFinder output from all 47 species
Ceric.36G023800.1 ATCXE12, CXE12,... not classified & original description: pacid=50568498... 0.03 OrthoFinder output from all 47 species
Ceric.36G031100.1 CXE17, AtCXE17,... not classified & original description: pacid=50568554... 0.03 OrthoFinder output from all 47 species
GSVIVT01031770001 AtCXE5, CXE5 Probable carboxylesterase 5 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
GSVIVT01031776001 No alias 2-hydroxyisoflavanone dehydratase OS=Glycyrrhiza echinata 0.03 OrthoFinder output from all 47 species
Gb_02816 CXE17, AtCXE17 Probable carboxylesterase 17 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Gb_24449 CXE17, AtCXE17 Probable carboxylesterase 17 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Gb_39264 CXE17, AtCXE17 Probable carboxylesterase 17 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
LOC_Os01g43670.1 LOC_Os01g43670 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os03g15270.1 CXE17, AtCXE17,... Probable carboxylesterase 17 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
LOC_Os06g11090.1 ATCXE12, CXE12,... Probable carboxylesterase 2 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
LOC_Os08g37040.1 LOC_Os08g37040 Probable carboxylesterase 2 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
LOC_Os09g28730.1 LOC_Os09g28730 Probable carboxylesterase 7 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Lfl_g30496 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
MA_55939g0010 No alias Probable carboxylesterase 15 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
MA_8180539g0010 CXE17, AtCXE17 Probable carboxylesterase 17 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
MA_855574g0010 ATGID1C, GID1C Gibberellin receptor GID1C OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
MA_893141g0010 No alias Tuliposide A-converting enzyme 1, chloroplastic... 0.05 OrthoFinder output from all 47 species
MA_9392760g0010 No alias Probable carboxylesterase 15 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
MA_9721034g0010 No alias Probable carboxylesterase 15 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Msp_g10582 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g16984 CXE17, AtCXE17 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0115.g021021 AtCXE18, CXE18 not classified & original description: CDS=1-1080 0.02 OrthoFinder output from all 47 species
Solyc02g085800.2.1 CXE17, AtCXE17,... Probable carboxylesterase 17 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Solyc09g075700.1.1 ATCXE12, CXE12,... 2-hydroxyisoflavanone dehydratase OS=Glycyrrhiza... 0.03 OrthoFinder output from all 47 species
Solyc12g056678.1.1 CXE20, AtCXE20,... Probable carboxylesterase 120 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Solyc12g150125.1.1 CXE20, AtCXE20,... Probable carboxylesterase 120 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Spa_g15890 CXE17, AtCXE17 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e035706_P001 AtCXE18, CXE18,... Probable carboxylesterase 18 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0016787 hydrolase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003916 DNA topoisomerase activity IEP HCCA
MF GO:0003917 DNA topoisomerase type I (single strand cut, ATP-independent) activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006265 DNA topological change IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0044183 protein folding chaperone IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
BP GO:0071103 DNA conformation change IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
MF GO:0140662 ATP-dependent protein folding chaperone IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR013094 AB_hydrolase_3 77 302
No external refs found!